Protein–RNA interactions for Protein: Q8N9V2

TRIML1, Probable E3 ubiquitin-protein ligase TRIML1, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML1Q8N9V2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIML1Q8N9V2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.67■■□□□ 1.38
TRIML1Q8N9V2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIML1Q8N9V2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
TRIML1Q8N9V2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIML1Q8N9V2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIML1Q8N9V2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
TRIML1Q8N9V2 AL136116.3-201ENST00000402907 1138 ntBASIC23.67■■□□□ 1.38
TRIML1Q8N9V2 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIML1Q8N9V2 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIML1Q8N9V2 AL049796.1-201ENST00000565336 1766 ntBASIC23.67■■□□□ 1.38
TRIML1Q8N9V2 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIML1Q8N9V2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
TRIML1Q8N9V2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIML1Q8N9V2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
TRIML1Q8N9V2 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC23.66■■□□□ 1.38
TRIML1Q8N9V2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.66■■□□□ 1.38
TRIML1Q8N9V2 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.66■■□□□ 1.38
TRIML1Q8N9V2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
TRIML1Q8N9V2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIML1Q8N9V2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
TRIML1Q8N9V2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.66■■□□□ 1.38
TRIML1Q8N9V2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRIML1Q8N9V2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC23.66■■□□□ 1.38
TRIML1Q8N9V2 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIML1Q8N9V2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIML1Q8N9V2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIML1Q8N9V2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIML1Q8N9V2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.65■■□□□ 1.38
TRIML1Q8N9V2 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIML1Q8N9V2 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIML1Q8N9V2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIML1Q8N9V2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
TRIML1Q8N9V2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.65■■□□□ 1.38
TRIML1Q8N9V2 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIML1Q8N9V2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC23.64■■□□□ 1.38
TRIML1Q8N9V2 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRIML1Q8N9V2 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRIML1Q8N9V2 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.38
TRIML1Q8N9V2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRIML1Q8N9V2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.64■■□□□ 1.38
TRIML1Q8N9V2 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIML1Q8N9V2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
TRIML1Q8N9V2 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.64■■□□□ 1.37
TRIML1Q8N9V2 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.64■■□□□ 1.37
TRIML1Q8N9V2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.64■■□□□ 1.37
TRIML1Q8N9V2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIML1Q8N9V2 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIML1Q8N9V2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
TRIML1Q8N9V2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIML1Q8N9V2 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIML1Q8N9V2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIML1Q8N9V2 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIML1Q8N9V2 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIML1Q8N9V2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.63■■□□□ 1.37
TRIML1Q8N9V2 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
TRIML1Q8N9V2 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.63■■□□□ 1.37
TRIML1Q8N9V2 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIML1Q8N9V2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIML1Q8N9V2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIML1Q8N9V2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.63■■□□□ 1.37
TRIML1Q8N9V2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
TRIML1Q8N9V2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIML1Q8N9V2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.61■■□□□ 1.37
TRIML1Q8N9V2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRIML1Q8N9V2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIML1Q8N9V2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIML1Q8N9V2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIML1Q8N9V2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
TRIML1Q8N9V2 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.61■■□□□ 1.37
TRIML1Q8N9V2 BX842568.3-201ENST00000418104 571 ntBASIC23.61■■□□□ 1.37
TRIML1Q8N9V2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.61■■□□□ 1.37
TRIML1Q8N9V2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.61■■□□□ 1.37
TRIML1Q8N9V2 AC133561.4-201ENST00000566112 224 ntBASIC23.61■■□□□ 1.37
TRIML1Q8N9V2 SMUG1P1-201ENST00000590640 811 ntBASIC23.61■■□□□ 1.37
TRIML1Q8N9V2 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIML1Q8N9V2 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRIML1Q8N9V2 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms