Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 AC104187.1-201ENST00000607510 612 ntBASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 AP006587.3-201ENST00000525742 1516 ntBASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM48Q8IWZ4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 AC127496.7-201ENST00000625110 1798 ntBASIC20.8■□□□□ 0.92
TRIM48Q8IWZ4 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM48Q8IWZ4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.79■□□□□ 0.92
TRIM48Q8IWZ4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM48Q8IWZ4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM48Q8IWZ4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM48Q8IWZ4 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TRIM48Q8IWZ4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.79■□□□□ 0.92
TRIM48Q8IWZ4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRIM48Q8IWZ4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM48Q8IWZ4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM48Q8IWZ4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM48Q8IWZ4 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM48Q8IWZ4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRIM48Q8IWZ4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM48Q8IWZ4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM48Q8IWZ4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM48Q8IWZ4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRIM48Q8IWZ4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM48Q8IWZ4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM48Q8IWZ4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM48Q8IWZ4 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.77■□□□□ 0.92
TRIM48Q8IWZ4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM48Q8IWZ4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM48Q8IWZ4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM48Q8IWZ4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM48Q8IWZ4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM48Q8IWZ4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TRIM48Q8IWZ4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM48Q8IWZ4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM48Q8IWZ4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM48Q8IWZ4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM48Q8IWZ4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.77■□□□□ 0.91
TRIM48Q8IWZ4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM48Q8IWZ4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms