Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL23A1Q86Y22 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL23A1Q86Y22 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
COL23A1Q86Y22 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL23A1Q86Y22 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL23A1Q86Y22 SERPINH1P1-201ENST00000419794 1249 ntBASIC27.06■■□□□ 1.92
COL23A1Q86Y22 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
COL23A1Q86Y22 MAX-217ENST00000557277 728 ntTSL 3 BASIC27.06■■□□□ 1.92
COL23A1Q86Y22 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC27.06■■□□□ 1.92
COL23A1Q86Y22 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL23A1Q86Y22 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL23A1Q86Y22 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
COL23A1Q86Y22 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
COL23A1Q86Y22 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.05■■□□□ 1.92
COL23A1Q86Y22 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.05■■□□□ 1.92
COL23A1Q86Y22 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC27.05■■□□□ 1.92
COL23A1Q86Y22 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC27.05■■□□□ 1.92
COL23A1Q86Y22 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
COL23A1Q86Y22 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL23A1Q86Y22 MIR718-201ENST00000390190 70 ntBASIC27.05■■□□□ 1.92
COL23A1Q86Y22 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL23A1Q86Y22 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC27.05■■□□□ 1.92
COL23A1Q86Y22 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
COL23A1Q86Y22 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC27.05■■□□□ 1.92
COL23A1Q86Y22 Z99916.2-201ENST00000604037 246 ntBASIC27.05■■□□□ 1.92
COL23A1Q86Y22 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
COL23A1Q86Y22 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
COL23A1Q86Y22 RBM17P2-201ENST00000616397 1405 ntBASIC27.05■■□□□ 1.92
COL23A1Q86Y22 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
COL23A1Q86Y22 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
COL23A1Q86Y22 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL23A1Q86Y22 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL23A1Q86Y22 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.04■■□□□ 1.92
COL23A1Q86Y22 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL23A1Q86Y22 RPPH1-201ENST00000516869 333 ntBASIC27.04■■□□□ 1.92
COL23A1Q86Y22 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC27.04■■□□□ 1.92
COL23A1Q86Y22 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC27.04■■□□□ 1.92
COL23A1Q86Y22 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
COL23A1Q86Y22 REXO1L12P-201ENST00000622156 912 ntBASIC27.04■■□□□ 1.92
COL23A1Q86Y22 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC27.04■■□□□ 1.92
COL23A1Q86Y22 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
COL23A1Q86Y22 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
COL23A1Q86Y22 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL23A1Q86Y22 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL23A1Q86Y22 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC27.03■■□□□ 1.92
COL23A1Q86Y22 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
COL23A1Q86Y22 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
COL23A1Q86Y22 FGF8-207ENST00000618991 856 ntTSL 3 BASIC27.03■■□□□ 1.92
COL23A1Q86Y22 AP006587.3-201ENST00000525742 1516 ntBASIC27.02■■□□□ 1.92
COL23A1Q86Y22 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
COL23A1Q86Y22 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC27.02■■□□□ 1.92
COL23A1Q86Y22 RNF121-214ENST00000533380 870 ntTSL 3 BASIC27.02■■□□□ 1.92
COL23A1Q86Y22 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
COL23A1Q86Y22 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
COL23A1Q86Y22 AC120498.10-201ENST00000621827 505 ntBASIC27.02■■□□□ 1.92
COL23A1Q86Y22 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC27.02■■□□□ 1.92
COL23A1Q86Y22 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.02■■□□□ 1.92
COL23A1Q86Y22 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
COL23A1Q86Y22 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC27.01■■□□□ 1.91
COL23A1Q86Y22 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC27.01■■□□□ 1.91
COL23A1Q86Y22 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC27.01■■□□□ 1.91
COL23A1Q86Y22 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC27.01■■□□□ 1.91
COL23A1Q86Y22 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC27.01■■□□□ 1.91
COL23A1Q86Y22 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC27.01■■□□□ 1.91
COL23A1Q86Y22 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC27.01■■□□□ 1.91
COL23A1Q86Y22 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
COL23A1Q86Y22 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.01■■□□□ 1.91
COL23A1Q86Y22 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
COL23A1Q86Y22 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
COL23A1Q86Y22 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
COL23A1Q86Y22 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
COL23A1Q86Y22 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
COL23A1Q86Y22 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
COL23A1Q86Y22 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27■■□□□ 1.91
COL23A1Q86Y22 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
COL23A1Q86Y22 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC27■■□□□ 1.91
COL23A1Q86Y22 LSM12P1-201ENST00000411836 588 ntBASIC27■■□□□ 1.91
COL23A1Q86Y22 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC27■■□□□ 1.91
COL23A1Q86Y22 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC27■■□□□ 1.91
COL23A1Q86Y22 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC27■■□□□ 1.91
COL23A1Q86Y22 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
COL23A1Q86Y22 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
COL23A1Q86Y22 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC27■■□□□ 1.91
COL23A1Q86Y22 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
COL23A1Q86Y22 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
COL23A1Q86Y22 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
COL23A1Q86Y22 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
COL23A1Q86Y22 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.99■■□□□ 1.91
COL23A1Q86Y22 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC26.99■■□□□ 1.91
COL23A1Q86Y22 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
COL23A1Q86Y22 SNORA78-201ENST00000459373 127 ntBASIC26.99■■□□□ 1.91
COL23A1Q86Y22 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC26.99■■□□□ 1.91
COL23A1Q86Y22 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.99■■□□□ 1.91
COL23A1Q86Y22 AC008175.2-201ENST00000612840 297 ntBASIC26.99■■□□□ 1.91
COL23A1Q86Y22 FAM197Y4-202ENST00000622692 608 ntBASIC26.99■■□□□ 1.91
COL23A1Q86Y22 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.99■■□□□ 1.91
COL23A1Q86Y22 OR7E47P-201ENST00000546390 1422 ntBASIC26.99■■□□□ 1.91
COL23A1Q86Y22 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
COL23A1Q86Y22 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.98■■□□□ 1.91
COL23A1Q86Y22 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms