Protein–RNA interactions for Protein: Q7Z4H3

HDDC2, HD domain-containing protein 2, humanhuman

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2Q7Z4H3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HDDC2Q7Z4H3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 AC024257.2-201ENST00000549699 147 ntBASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 AC233992.3-201ENST00000607491 485 ntBASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
HDDC2Q7Z4H3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDDC2Q7Z4H3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDDC2Q7Z4H3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDDC2Q7Z4H3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDDC2Q7Z4H3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HDDC2Q7Z4H3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.23■□□□□ 0.67
HDDC2Q7Z4H3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HDDC2Q7Z4H3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.23■□□□□ 0.67
HDDC2Q7Z4H3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.23■□□□□ 0.67
HDDC2Q7Z4H3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HDDC2Q7Z4H3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HDDC2Q7Z4H3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.23■□□□□ 0.67
HDDC2Q7Z4H3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDDC2Q7Z4H3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HDDC2Q7Z4H3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDDC2Q7Z4H3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HDDC2Q7Z4H3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDDC2Q7Z4H3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HDDC2Q7Z4H3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.22■□□□□ 0.67
HDDC2Q7Z4H3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.22■□□□□ 0.67
HDDC2Q7Z4H3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDDC2Q7Z4H3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDDC2Q7Z4H3 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDDC2Q7Z4H3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HDDC2Q7Z4H3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDDC2Q7Z4H3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDDC2Q7Z4H3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HDDC2Q7Z4H3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 AC027682.1-201ENST00000562846 899 ntBASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HDDC2Q7Z4H3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.2■□□□□ 0.66
HDDC2Q7Z4H3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
HDDC2Q7Z4H3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDDC2Q7Z4H3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
HDDC2Q7Z4H3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HDDC2Q7Z4H3 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.2■□□□□ 0.66
HDDC2Q7Z4H3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms