Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 CLTA-210ENST00000540080 989 ntTSL 2 BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FAM78BQ5VT40 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 Z92544.1-202ENST00000571933 1220 ntBASIC16.8■□□□□ 0.28
FAM78BQ5VT40 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FAM78BQ5VT40 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 AC239859.2-201ENST00000444165 318 ntBASIC16.79■□□□□ 0.28
FAM78BQ5VT40 AC009299.2-201ENST00000482477 511 ntBASIC16.79■□□□□ 0.28
FAM78BQ5VT40 NKILA-201ENST00000613231 537 ntTSL 4 BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
FAM78BQ5VT40 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 AL451085.2-201ENST00000605085 799 ntBASIC16.78■□□□□ 0.28
FAM78BQ5VT40 MIR4787-201ENST00000607364 84 ntBASIC16.78■□□□□ 0.28
FAM78BQ5VT40 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
FAM78BQ5VT40 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC16.77■□□□□ 0.28
FAM78BQ5VT40 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
FAM78BQ5VT40 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.77■□□□□ 0.28
FAM78BQ5VT40 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
FAM78BQ5VT40 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FAM78BQ5VT40 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FAM78BQ5VT40 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
FAM78BQ5VT40 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
FAM78BQ5VT40 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
FAM78BQ5VT40 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC16.77■□□□□ 0.28
FAM78BQ5VT40 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
FAM78BQ5VT40 AC092028.1-203ENST00000608262 953 ntBASIC16.77■□□□□ 0.28
FAM78BQ5VT40 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FAM78BQ5VT40 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
FAM78BQ5VT40 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.77■□□□□ 0.27
FAM78BQ5VT40 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
FAM78BQ5VT40 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
FAM78BQ5VT40 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.77■□□□□ 0.27
FAM78BQ5VT40 AC138932.1-201ENST00000534164 6830 ntBASIC16.76■□□□□ 0.27
FAM78BQ5VT40 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.76■□□□□ 0.27
FAM78BQ5VT40 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
FAM78BQ5VT40 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC16.76■□□□□ 0.27
FAM78BQ5VT40 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
FAM78BQ5VT40 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
FAM78BQ5VT40 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
FAM78BQ5VT40 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms