Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HIST1H1AQ02539 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC16.18■□□□□ 0.18
HIST1H1AQ02539 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 AC244015.2-201ENST00000616358 1861 ntBASIC16.17■□□□□ 0.18
HIST1H1AQ02539 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.17■□□□□ 0.18
HIST1H1AQ02539 RBM38-205ENST00000440234 686 ntTSL 2 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 AC087239.1-201ENST00000622671 572 ntBASIC16.17■□□□□ 0.18
HIST1H1AQ02539 AL031602.1-201ENST00000633169 911 ntBASIC16.17■□□□□ 0.18
HIST1H1AQ02539 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HIST1H1AQ02539 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 SYT6-210ENST00000641643 1587 ntBASIC16.16■□□□□ 0.18
HIST1H1AQ02539 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
HIST1H1AQ02539 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
HIST1H1AQ02539 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.15■□□□□ 0.18
HIST1H1AQ02539 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms