Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SRPXP78539 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.5■□□□□ 0.39
SRPXP78539 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
SRPXP78539 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SRPXP78539 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SRPXP78539 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRPXP78539 AC021242.3-201ENST00000607598 1377 ntBASIC17.5■□□□□ 0.39
SRPXP78539 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SRPXP78539 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SRPXP78539 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SRPXP78539 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SRPXP78539 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.49■□□□□ 0.39
SRPXP78539 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRPXP78539 LINC01006-201ENST00000333319 2292 ntBASIC17.49■□□□□ 0.39
SRPXP78539 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRPXP78539 AL049796.1-201ENST00000565336 1766 ntBASIC17.49■□□□□ 0.39
SRPXP78539 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRPXP78539 FEM1AP1-201ENST00000431297 1995 ntBASIC17.49■□□□□ 0.39
SRPXP78539 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRPXP78539 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SRPXP78539 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRPXP78539 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SRPXP78539 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.48■□□□□ 0.39
SRPXP78539 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRPXP78539 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.48■□□□□ 0.39
SRPXP78539 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRPXP78539 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRPXP78539 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRPXP78539 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRPXP78539 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRPXP78539 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
SRPXP78539 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SRPXP78539 AC103724.3-201ENST00000564481 992 ntBASIC17.48■□□□□ 0.39
SRPXP78539 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.48■□□□□ 0.39
SRPXP78539 AC068587.7-201ENST00000641602 218 ntBASIC17.48■□□□□ 0.39
SRPXP78539 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRPXP78539 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRPXP78539 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.48■□□□□ 0.39
SRPXP78539 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRPXP78539 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRPXP78539 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRPXP78539 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SRPXP78539 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.48■□□□□ 0.39
SRPXP78539 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRPXP78539 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRPXP78539 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.47■□□□□ 0.39
SRPXP78539 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SRPXP78539 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.47■□□□□ 0.39
SRPXP78539 AC026471.6-201ENST00000622954 1905 ntBASIC17.47■□□□□ 0.39
SRPXP78539 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRPXP78539 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.47■□□□□ 0.39
SRPXP78539 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRPXP78539 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRPXP78539 BX664725.1-201ENST00000438252 379 ntBASIC17.47■□□□□ 0.39
SRPXP78539 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SRPXP78539 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRPXP78539 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRPXP78539 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.47■□□□□ 0.39
SRPXP78539 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRPXP78539 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.47■□□□□ 0.39
SRPXP78539 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SRPXP78539 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SRPXP78539 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SRPXP78539 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.47■□□□□ 0.39
SRPXP78539 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRPXP78539 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.46■□□□□ 0.39
SRPXP78539 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SRPXP78539 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRPXP78539 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SRPXP78539 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRPXP78539 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRPXP78539 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRPXP78539 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRPXP78539 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRPXP78539 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRPXP78539 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRPXP78539 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRPXP78539 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRPXP78539 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SRPXP78539 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.46■□□□□ 0.39
SRPXP78539 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRPXP78539 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SRPXP78539 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRPXP78539 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SRPXP78539 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SRPXP78539 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SRPXP78539 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SRPXP78539 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPXP78539 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPXP78539 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPXP78539 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPXP78539 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRPXP78539 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPXP78539 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SRPXP78539 AL031848.2-201ENST00000607670 837 ntBASIC17.45■□□□□ 0.38
SRPXP78539 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
SRPXP78539 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
SRPXP78539 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPXP78539 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SRPXP78539 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms