Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
DEFA3P59666 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.68■□□□□ 0.58
DEFA3P59666 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
DEFA3P59666 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DEFA3P59666 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DEFA3P59666 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DEFA3P59666 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.68■□□□□ 0.58
DEFA3P59666 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.68■□□□□ 0.58
DEFA3P59666 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DEFA3P59666 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.68■□□□□ 0.58
DEFA3P59666 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
DEFA3P59666 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DEFA3P59666 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DEFA3P59666 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.68■□□□□ 0.58
DEFA3P59666 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DEFA3P59666 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
DEFA3P59666 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
DEFA3P59666 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.68■□□□□ 0.58
DEFA3P59666 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
DEFA3P59666 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.68■□□□□ 0.58
DEFA3P59666 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
DEFA3P59666 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
DEFA3P59666 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
DEFA3P59666 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DEFA3P59666 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEFA3P59666 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
DEFA3P59666 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
DEFA3P59666 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
DEFA3P59666 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
DEFA3P59666 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
DEFA3P59666 SMPD5-203ENST00000639008 1464 ntBASIC18.67■□□□□ 0.58
DEFA3P59666 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEFA3P59666 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEFA3P59666 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.67■□□□□ 0.58
DEFA3P59666 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
DEFA3P59666 AC131274.2-201ENST00000580697 1507 ntBASIC18.67■□□□□ 0.58
DEFA3P59666 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.67■□□□□ 0.58
DEFA3P59666 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEFA3P59666 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.67■□□□□ 0.58
DEFA3P59666 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEFA3P59666 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
DEFA3P59666 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEFA3P59666 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEFA3P59666 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DEFA3P59666 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.66■□□□□ 0.58
DEFA3P59666 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.66■□□□□ 0.58
DEFA3P59666 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
DEFA3P59666 PCDHAC2-203ENST00000615316 3011 ntBASIC18.66■□□□□ 0.58
DEFA3P59666 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
DEFA3P59666 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
DEFA3P59666 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEFA3P59666 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
DEFA3P59666 AP005212.1-201ENST00000581547 1997 ntBASIC18.66■□□□□ 0.58
DEFA3P59666 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.66■□□□□ 0.58
DEFA3P59666 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.65■□□□□ 0.58
DEFA3P59666 SMG8-203ENST00000578922 2178 ntBASIC18.65■□□□□ 0.58
DEFA3P59666 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEFA3P59666 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEFA3P59666 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEFA3P59666 AL157400.5-201ENST00000507624 621 ntBASIC18.65■□□□□ 0.58
DEFA3P59666 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
DEFA3P59666 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC18.65■□□□□ 0.58
DEFA3P59666 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
DEFA3P59666 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
DEFA3P59666 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.64■□□□□ 0.58
DEFA3P59666 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
DEFA3P59666 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
DEFA3P59666 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
DEFA3P59666 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA3P59666 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.64■□□□□ 0.57
DEFA3P59666 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA3P59666 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA3P59666 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA3P59666 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA3P59666 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.64■□□□□ 0.57
DEFA3P59666 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA3P59666 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
DEFA3P59666 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA3P59666 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA3P59666 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA3P59666 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
DEFA3P59666 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
DEFA3P59666 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEFA3P59666 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DEFA3P59666 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEFA3P59666 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEFA3P59666 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
DEFA3P59666 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEFA3P59666 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEFA3P59666 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEFA3P59666 AP006261.1-201ENST00000584783 668 ntBASIC18.63■□□□□ 0.57
DEFA3P59666 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DEFA3P59666 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DEFA3P59666 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
DEFA3P59666 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEFA3P59666 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DEFA3P59666 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
DEFA3P59666 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
DEFA3P59666 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
DEFA3P59666 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms