Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN6P56747 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN6P56747 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CLDN6P56747 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN6P56747 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLDN6P56747 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.47■□□□□ 0.87
CLDN6P56747 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.47■□□□□ 0.87
CLDN6P56747 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLDN6P56747 GCSHP5-201ENST00000443090 522 ntBASIC20.47■□□□□ 0.87
CLDN6P56747 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN6P56747 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.47■□□□□ 0.87
CLDN6P56747 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CLDN6P56747 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.47■□□□□ 0.87
CLDN6P56747 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CLDN6P56747 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CLDN6P56747 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.46■□□□□ 0.87
CLDN6P56747 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN6P56747 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.46■□□□□ 0.87
CLDN6P56747 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN6P56747 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.46■□□□□ 0.87
CLDN6P56747 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN6P56747 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.46■□□□□ 0.87
CLDN6P56747 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.46■□□□□ 0.87
CLDN6P56747 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.46■□□□□ 0.87
CLDN6P56747 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CLDN6P56747 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.46■□□□□ 0.87
CLDN6P56747 EEF1DP3-203ENST00000566025 782 ntBASIC20.46■□□□□ 0.87
CLDN6P56747 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.46■□□□□ 0.87
CLDN6P56747 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.46■□□□□ 0.87
CLDN6P56747 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.46■□□□□ 0.87
CLDN6P56747 OR10C1-204ENST00000622521 1039 ntBASIC20.46■□□□□ 0.87
CLDN6P56747 AC008694.1-202ENST00000636953 945 ntBASIC20.46■□□□□ 0.87
CLDN6P56747 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.46■□□□□ 0.87
CLDN6P56747 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN6P56747 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN6P56747 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN6P56747 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN6P56747 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CLDN6P56747 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.45■□□□□ 0.86
CLDN6P56747 LINC00526-201ENST00000581067 1875 ntBASIC20.45■□□□□ 0.86
CLDN6P56747 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CLDN6P56747 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN6P56747 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN6P56747 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN6P56747 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLDN6P56747 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CLDN6P56747 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.45■□□□□ 0.86
CLDN6P56747 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.45■□□□□ 0.86
CLDN6P56747 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.45■□□□□ 0.86
CLDN6P56747 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.45■□□□□ 0.86
CLDN6P56747 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CLDN6P56747 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.45■□□□□ 0.86
CLDN6P56747 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.45■□□□□ 0.86
CLDN6P56747 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.45■□□□□ 0.86
CLDN6P56747 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.45■□□□□ 0.86
CLDN6P56747 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
CLDN6P56747 AC006058.3-201ENST00000606217 1069 ntBASIC20.45■□□□□ 0.86
CLDN6P56747 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CLDN6P56747 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN6P56747 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLDN6P56747 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.45■□□□□ 0.86
CLDN6P56747 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN6P56747 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CLDN6P56747 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN6P56747 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN6P56747 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.44■□□□□ 0.86
CLDN6P56747 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CLDN6P56747 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN6P56747 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.44■□□□□ 0.86
CLDN6P56747 AC007322.4-201ENST00000509611 723 ntBASIC20.44■□□□□ 0.86
CLDN6P56747 AC069236.1-201ENST00000604339 616 ntBASIC20.44■□□□□ 0.86
CLDN6P56747 MYC-209ENST00000641252 345 ntBASIC20.44■□□□□ 0.86
CLDN6P56747 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN6P56747 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLDN6P56747 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.44■□□□□ 0.86
CLDN6P56747 OR7E47P-201ENST00000546390 1422 ntBASIC20.44■□□□□ 0.86
CLDN6P56747 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN6P56747 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN6P56747 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.43■□□□□ 0.86
CLDN6P56747 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN6P56747 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN6P56747 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CLDN6P56747 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.43■□□□□ 0.86
CLDN6P56747 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN6P56747 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN6P56747 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN6P56747 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN6P56747 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.43■□□□□ 0.86
CLDN6P56747 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.43■□□□□ 0.86
CLDN6P56747 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
CLDN6P56747 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.43■□□□□ 0.86
CLDN6P56747 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.43■□□□□ 0.86
CLDN6P56747 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.43■□□□□ 0.86
CLDN6P56747 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
CLDN6P56747 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN6P56747 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
CLDN6P56747 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.43■□□□□ 0.86
CLDN6P56747 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.43■□□□□ 0.86
CLDN6P56747 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLDN6P56747 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms