Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.72■□□□□ 0.91
AP1S2P56377 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
AP1S2P56377 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
AP1S2P56377 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP1S2P56377 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.72■□□□□ 0.91
AP1S2P56377 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP1S2P56377 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP1S2P56377 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
AP1S2P56377 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S2P56377 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.71■□□□□ 0.91
AP1S2P56377 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S2P56377 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S2P56377 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S2P56377 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.71■□□□□ 0.91
AP1S2P56377 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.71■□□□□ 0.91
AP1S2P56377 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.71■□□□□ 0.91
AP1S2P56377 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.71■□□□□ 0.91
AP1S2P56377 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S2P56377 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.71■□□□□ 0.91
AP1S2P56377 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.71■□□□□ 0.91
AP1S2P56377 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.71■□□□□ 0.91
AP1S2P56377 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
AP1S2P56377 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
AP1S2P56377 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
AP1S2P56377 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
AP1S2P56377 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S2P56377 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S2P56377 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S2P56377 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S2P56377 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S2P56377 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S2P56377 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S2P56377 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S2P56377 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
AP1S2P56377 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.7■□□□□ 0.9
AP1S2P56377 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
AP1S2P56377 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
AP1S2P56377 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.7■□□□□ 0.9
AP1S2P56377 CLDN5-201ENST00000403084 2357 ntBASIC20.7■□□□□ 0.9
AP1S2P56377 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S2P56377 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S2P56377 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S2P56377 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.69■□□□□ 0.9
AP1S2P56377 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
AP1S2P56377 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.69■□□□□ 0.9
AP1S2P56377 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S2P56377 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.69■□□□□ 0.9
AP1S2P56377 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.69■□□□□ 0.9
AP1S2P56377 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.69■□□□□ 0.9
AP1S2P56377 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S2P56377 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.69■□□□□ 0.9
AP1S2P56377 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S2P56377 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.69■□□□□ 0.9
AP1S2P56377 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.69■□□□□ 0.9
AP1S2P56377 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.69■□□□□ 0.9
AP1S2P56377 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.69■□□□□ 0.9
AP1S2P56377 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S2P56377 Z98882.1-201ENST00000622160 2253 ntBASIC20.69■□□□□ 0.9
AP1S2P56377 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
AP1S2P56377 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S2P56377 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S2P56377 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.68■□□□□ 0.9
AP1S2P56377 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
AP1S2P56377 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S2P56377 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S2P56377 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S2P56377 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S2P56377 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.68■□□□□ 0.9
AP1S2P56377 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.68■□□□□ 0.9
AP1S2P56377 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.68■□□□□ 0.9
AP1S2P56377 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S2P56377 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
AP1S2P56377 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.68■□□□□ 0.9
AP1S2P56377 TPRG1LP1-201ENST00000598702 760 ntBASIC20.68■□□□□ 0.9
AP1S2P56377 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
AP1S2P56377 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S2P56377 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S2P56377 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.68■□□□□ 0.9
AP1S2P56377 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S2P56377 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
AP1S2P56377 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S2P56377 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S2P56377 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S2P56377 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S2P56377 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.67■□□□□ 0.9
AP1S2P56377 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S2P56377 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S2P56377 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
AP1S2P56377 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.67■□□□□ 0.9
AP1S2P56377 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S2P56377 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.67■□□□□ 0.9
AP1S2P56377 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
AP1S2P56377 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC20.66■□□□□ 0.9
AP1S2P56377 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S2P56377 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S2P56377 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.66■□□□□ 0.9
AP1S2P56377 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
AP1S2P56377 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
AP1S2P56377 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.66■□□□□ 0.9
AP1S2P56377 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms