Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.07■□□□□ 0.8
CLK3P49761 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLK3P49761 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.07■□□□□ 0.8
CLK3P49761 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.07■□□□□ 0.8
CLK3P49761 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.07■□□□□ 0.8
CLK3P49761 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLK3P49761 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLK3P49761 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLK3P49761 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLK3P49761 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLK3P49761 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLK3P49761 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
CLK3P49761 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLK3P49761 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLK3P49761 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CLK3P49761 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLK3P49761 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLK3P49761 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CLK3P49761 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLK3P49761 AC010525.1-201ENST00000585559 441 ntBASIC20.06■□□□□ 0.8
CLK3P49761 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.06■□□□□ 0.8
CLK3P49761 AL031602.1-201ENST00000633169 911 ntBASIC20.06■□□□□ 0.8
CLK3P49761 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLK3P49761 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLK3P49761 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLK3P49761 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.06■□□□□ 0.8
CLK3P49761 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.06■□□□□ 0.8
CLK3P49761 AC244015.2-201ENST00000616358 1861 ntBASIC20.05■□□□□ 0.8
CLK3P49761 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.05■□□□□ 0.8
CLK3P49761 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLK3P49761 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLK3P49761 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLK3P49761 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLK3P49761 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.05■□□□□ 0.8
CLK3P49761 AC142381.2-201ENST00000566120 298 ntBASIC20.05■□□□□ 0.8
CLK3P49761 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLK3P49761 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.05■□□□□ 0.8
CLK3P49761 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CLK3P49761 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
CLK3P49761 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLK3P49761 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLK3P49761 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLK3P49761 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLK3P49761 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.05■□□□□ 0.8
CLK3P49761 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLK3P49761 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLK3P49761 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLK3P49761 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLK3P49761 AC099791.1-201ENST00000416440 715 ntBASIC20.04■□□□□ 0.8
CLK3P49761 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.04■□□□□ 0.8
CLK3P49761 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.04■□□□□ 0.8
CLK3P49761 AC005837.3-201ENST00000612163 286 ntBASIC20.04■□□□□ 0.8
CLK3P49761 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.04■□□□□ 0.8
CLK3P49761 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.04■□□□□ 0.8
CLK3P49761 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLK3P49761 RASA4CP-201ENST00000424092 1398 ntBASIC20.04■□□□□ 0.8
CLK3P49761 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLK3P49761 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLK3P49761 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLK3P49761 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CLK3P49761 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLK3P49761 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLK3P49761 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLK3P49761 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLK3P49761 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CLK3P49761 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLK3P49761 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLK3P49761 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLK3P49761 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CLK3P49761 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.03■□□□□ 0.8
CLK3P49761 AC010141.3-201ENST00000456659 717 ntBASIC20.03■□□□□ 0.8
CLK3P49761 AC091305.1-201ENST00000479476 895 ntBASIC20.03■□□□□ 0.8
CLK3P49761 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.03■□□□□ 0.8
CLK3P49761 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLK3P49761 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLK3P49761 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CLK3P49761 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLK3P49761 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CLK3P49761 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
CLK3P49761 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLK3P49761 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLK3P49761 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLK3P49761 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLK3P49761 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLK3P49761 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CLK3P49761 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CLK3P49761 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLK3P49761 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLK3P49761 AP001330.3-201ENST00000520123 633 ntBASIC20.02■□□□□ 0.8
CLK3P49761 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.02■□□□□ 0.8
CLK3P49761 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.02■□□□□ 0.8
CLK3P49761 AF213884.3-201ENST00000563833 479 ntBASIC20.02■□□□□ 0.8
CLK3P49761 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CLK3P49761 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CLK3P49761 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CLK3P49761 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLK3P49761 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.02■□□□□ 0.8
CLK3P49761 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CLK3P49761 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CLK3P49761 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms