Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC27■■□□□ 1.91
RFC4P35249 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC27■■□□□ 1.91
RFC4P35249 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC27■■□□□ 1.91
RFC4P35249 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC27■■□□□ 1.91
RFC4P35249 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RFC4P35249 AL591742.1-201ENST00000604433 565 ntBASIC27■■□□□ 1.91
RFC4P35249 INO80E-214ENST00000620599 515 ntTSL 2 BASIC27■■□□□ 1.91
RFC4P35249 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC27■■□□□ 1.91
RFC4P35249 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
RFC4P35249 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
RFC4P35249 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RFC4P35249 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RFC4P35249 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RFC4P35249 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RFC4P35249 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.99■■□□□ 1.91
RFC4P35249 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RFC4P35249 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.99■■□□□ 1.91
RFC4P35249 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC26.99■■□□□ 1.91
RFC4P35249 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.99■■□□□ 1.91
RFC4P35249 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
RFC4P35249 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
RFC4P35249 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RFC4P35249 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC26.99■■□□□ 1.91
RFC4P35249 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.98■■□□□ 1.91
RFC4P35249 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RFC4P35249 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RFC4P35249 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC26.98■■□□□ 1.91
RFC4P35249 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RFC4P35249 POU5F1P4-201ENST00000413175 1085 ntBASIC26.98■■□□□ 1.91
RFC4P35249 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.98■■□□□ 1.91
RFC4P35249 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.98■■□□□ 1.91
RFC4P35249 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.98■■□□□ 1.91
RFC4P35249 AL162412.1-201ENST00000567129 965 ntBASIC26.98■■□□□ 1.91
RFC4P35249 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.98■■□□□ 1.91
RFC4P35249 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.98■■□□□ 1.91
RFC4P35249 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
RFC4P35249 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RFC4P35249 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RFC4P35249 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RFC4P35249 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RFC4P35249 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
RFC4P35249 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
RFC4P35249 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
RFC4P35249 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.97■■□□□ 1.91
RFC4P35249 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC26.97■■□□□ 1.91
RFC4P35249 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC26.97■■□□□ 1.91
RFC4P35249 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RFC4P35249 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RFC4P35249 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RFC4P35249 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.97■■□□□ 1.91
RFC4P35249 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.96■■□□□ 1.91
RFC4P35249 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.96■■□□□ 1.91
RFC4P35249 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.96■■□□□ 1.91
RFC4P35249 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
RFC4P35249 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RFC4P35249 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC26.96■■□□□ 1.91
RFC4P35249 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RFC4P35249 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
RFC4P35249 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
RFC4P35249 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.91
RFC4P35249 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
RFC4P35249 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.9
RFC4P35249 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
RFC4P35249 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC26.95■■□□□ 1.9
RFC4P35249 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.95■■□□□ 1.9
RFC4P35249 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC26.95■■□□□ 1.9
RFC4P35249 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.95■■□□□ 1.9
RFC4P35249 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RFC4P35249 RBM17P2-201ENST00000616397 1405 ntBASIC26.95■■□□□ 1.9
RFC4P35249 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.95■■□□□ 1.9
RFC4P35249 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RFC4P35249 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RFC4P35249 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RFC4P35249 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.94■■□□□ 1.9
RFC4P35249 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
RFC4P35249 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
RFC4P35249 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
RFC4P35249 OR2A1-AS1-201ENST00000462305 773 ntBASIC26.94■■□□□ 1.9
RFC4P35249 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC26.94■■□□□ 1.9
RFC4P35249 AC026366.1-201ENST00000488803 879 ntBASIC26.94■■□□□ 1.9
RFC4P35249 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC26.94■■□□□ 1.9
RFC4P35249 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
RFC4P35249 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RFC4P35249 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
RFC4P35249 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RFC4P35249 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RFC4P35249 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.93■■□□□ 1.9
RFC4P35249 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.93■■□□□ 1.9
RFC4P35249 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
RFC4P35249 UNC93B4-201ENST00000505679 747 ntBASIC26.93■■□□□ 1.9
RFC4P35249 UNC93B5-201ENST00000530315 699 ntBASIC26.93■■□□□ 1.9
RFC4P35249 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
RFC4P35249 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.93■■□□□ 1.9
RFC4P35249 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC26.93■■□□□ 1.9
RFC4P35249 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.93■■□□□ 1.9
RFC4P35249 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
RFC4P35249 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RFC4P35249 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
RFC4P35249 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
RFC4P35249 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms