Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC12P31275 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC12P31275 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC12P31275 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC12P31275 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HOXC12P31275 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC12P31275 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXC12P31275 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC12P31275 AC127496.7-201ENST00000625110 1798 ntBASIC18.81■□□□□ 0.6
HOXC12P31275 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HOXC12P31275 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC12P31275 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC12P31275 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXC12P31275 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC12P31275 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
HOXC12P31275 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC12P31275 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HOXC12P31275 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXC12P31275 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.8■□□□□ 0.6
HOXC12P31275 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXC12P31275 KRT18P61-201ENST00000585825 1298 ntBASIC18.8■□□□□ 0.6
HOXC12P31275 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC12P31275 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXC12P31275 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC12P31275 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC12P31275 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXC12P31275 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXC12P31275 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HOXC12P31275 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXC12P31275 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HOXC12P31275 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC12P31275 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC12P31275 AC005224.4-201ENST00000583262 1652 ntBASIC18.79■□□□□ 0.6
HOXC12P31275 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
HOXC12P31275 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC12P31275 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC12P31275 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.79■□□□□ 0.6
HOXC12P31275 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.79■□□□□ 0.6
HOXC12P31275 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.79■□□□□ 0.6
HOXC12P31275 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXC12P31275 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXC12P31275 TMEM191A-211ENST00000637163 1067 ntBASIC18.79■□□□□ 0.6
HOXC12P31275 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC12P31275 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC12P31275 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXC12P31275 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC12P31275 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.79■□□□□ 0.6
HOXC12P31275 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC12P31275 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
HOXC12P31275 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC12P31275 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC12P31275 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HOXC12P31275 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC12P31275 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC12P31275 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC12P31275 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC12P31275 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC12P31275 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC12P31275 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXC12P31275 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC12P31275 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXC12P31275 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.78■□□□□ 0.6
HOXC12P31275 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.78■□□□□ 0.6
HOXC12P31275 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC12P31275 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC12P31275 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HOXC12P31275 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC12P31275 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC12P31275 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC12P31275 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC12P31275 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC12P31275 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC12P31275 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC12P31275 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC12P31275 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HOXC12P31275 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXC12P31275 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.77■□□□□ 0.6
HOXC12P31275 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.77■□□□□ 0.6
HOXC12P31275 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.77■□□□□ 0.6
HOXC12P31275 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HOXC12P31275 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HOXC12P31275 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.59
HOXC12P31275 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HOXC12P31275 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.77■□□□□ 0.59
HOXC12P31275 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HOXC12P31275 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC12P31275 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HOXC12P31275 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC12P31275 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.76■□□□□ 0.59
HOXC12P31275 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.76■□□□□ 0.59
HOXC12P31275 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HOXC12P31275 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC12P31275 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC12P31275 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.76■□□□□ 0.59
HOXC12P31275 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.76■□□□□ 0.59
HOXC12P31275 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC12P31275 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HOXC12P31275 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.76■□□□□ 0.59
HOXC12P31275 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.76■□□□□ 0.59
HOXC12P31275 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms