Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL1P22362 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL1P22362 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL1P22362 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL1P22362 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL1P22362 AL049796.1-201ENST00000565336 1766 ntBASIC18.34■□□□□ 0.53
CCL1P22362 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL1P22362 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCL1P22362 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.33■□□□□ 0.53
CCL1P22362 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCL1P22362 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CCL1P22362 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL1P22362 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.33■□□□□ 0.53
CCL1P22362 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL1P22362 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL1P22362 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL1P22362 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCL1P22362 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL1P22362 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCL1P22362 IGHV3-19-201ENST00000521488 291 ntBASIC18.33■□□□□ 0.52
CCL1P22362 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.33■□□□□ 0.52
CCL1P22362 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCL1P22362 AC024257.2-201ENST00000549699 147 ntBASIC18.33■□□□□ 0.52
CCL1P22362 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCL1P22362 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCL1P22362 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CCL1P22362 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL1P22362 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL1P22362 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.32■□□□□ 0.52
CCL1P22362 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL1P22362 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CCL1P22362 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL1P22362 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.32■□□□□ 0.52
CCL1P22362 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL1P22362 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.32■□□□□ 0.52
CCL1P22362 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.32■□□□□ 0.52
CCL1P22362 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.32■□□□□ 0.52
CCL1P22362 AL136162.1-201ENST00000607711 1078 ntBASIC18.32■□□□□ 0.52
CCL1P22362 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL1P22362 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL1P22362 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCL1P22362 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.32■□□□□ 0.52
CCL1P22362 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCL1P22362 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL1P22362 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL1P22362 AC135279.3-201ENST00000610945 1311 ntBASIC18.31■□□□□ 0.52
CCL1P22362 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL1P22362 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL1P22362 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL1P22362 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL1P22362 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCL1P22362 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL1P22362 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.31■□□□□ 0.52
CCL1P22362 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.31■□□□□ 0.52
CCL1P22362 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL1P22362 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CCL1P22362 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.31■□□□□ 0.52
CCL1P22362 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL1P22362 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL1P22362 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CCL1P22362 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL1P22362 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
CCL1P22362 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL1P22362 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL1P22362 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL1P22362 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL1P22362 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL1P22362 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL1P22362 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL1P22362 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CCL1P22362 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
CCL1P22362 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL1P22362 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL1P22362 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL1P22362 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL1P22362 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.3■□□□□ 0.52
CCL1P22362 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL1P22362 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CCL1P22362 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.3■□□□□ 0.52
CCL1P22362 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CCL1P22362 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL1P22362 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL1P22362 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL1P22362 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL1P22362 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCL1P22362 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCL1P22362 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.29■□□□□ 0.52
CCL1P22362 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL1P22362 AC126544.1-201ENST00000580842 1059 ntBASIC18.29■□□□□ 0.52
CCL1P22362 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.29■□□□□ 0.52
CCL1P22362 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.29■□□□□ 0.52
CCL1P22362 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL1P22362 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL1P22362 AC009237.3-201ENST00000393279 1427 ntBASIC18.29■□□□□ 0.52
CCL1P22362 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCL1P22362 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCL1P22362 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCL1P22362 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms