Protein–RNA interactions for Protein: P18545

PDE6G, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma, humanhuman

Predictions only

Length 87 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6GP18545 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6GP18545 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
PDE6GP18545 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC13.18□□□□□ -0.3
PDE6GP18545 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
PDE6GP18545 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6GP18545 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6GP18545 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.18□□□□□ -0.3
PDE6GP18545 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6GP18545 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
PDE6GP18545 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC13.18□□□□□ -0.3
PDE6GP18545 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
PDE6GP18545 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
PDE6GP18545 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6GP18545 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6GP18545 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
PDE6GP18545 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6GP18545 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6GP18545 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6GP18545 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6GP18545 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC13.17□□□□□ -0.3
PDE6GP18545 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PDE6GP18545 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PDE6GP18545 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC13.17□□□□□ -0.3
PDE6GP18545 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6GP18545 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6GP18545 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
PDE6GP18545 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6GP18545 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
PDE6GP18545 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC13.17□□□□□ -0.3
PDE6GP18545 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6GP18545 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6GP18545 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6GP18545 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
PDE6GP18545 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6GP18545 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
PDE6GP18545 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC13.16□□□□□ -0.3
PDE6GP18545 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC13.16□□□□□ -0.3
PDE6GP18545 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
PDE6GP18545 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC13.16□□□□□ -0.3
PDE6GP18545 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC13.16□□□□□ -0.3
PDE6GP18545 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 HES6-205ENST00000409356 528 ntTSL 2 BASIC13.16□□□□□ -0.3
PDE6GP18545 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC13.16□□□□□ -0.3
PDE6GP18545 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC13.16□□□□□ -0.3
PDE6GP18545 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 NRG1-221ENST00000614767 762 ntTSL 5 BASIC13.16□□□□□ -0.3
PDE6GP18545 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
PDE6GP18545 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 AC131274.2-201ENST00000580697 1507 ntBASIC13.16□□□□□ -0.3
PDE6GP18545 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
PDE6GP18545 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
PDE6GP18545 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
PDE6GP18545 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 AL020996.1-203ENST00000536896 2307 ntBASIC13.16□□□□□ -0.3
PDE6GP18545 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
PDE6GP18545 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC13.16□□□□□ -0.3
PDE6GP18545 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
PDE6GP18545 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
PDE6GP18545 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PDE6GP18545 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC13.15□□□□□ -0.3
PDE6GP18545 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PDE6GP18545 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PDE6GP18545 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
PDE6GP18545 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PDE6GP18545 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
PDE6GP18545 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PDE6GP18545 AL157400.5-201ENST00000507624 621 ntBASIC13.15□□□□□ -0.3
PDE6GP18545 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
PDE6GP18545 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.15□□□□□ -0.3
PDE6GP18545 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PDE6GP18545 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PDE6GP18545 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC13.15□□□□□ -0.3
PDE6GP18545 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
PDE6GP18545 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
PDE6GP18545 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.15□□□□□ -0.3
PDE6GP18545 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PDE6GP18545 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PDE6GP18545 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PDE6GP18545 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
PDE6GP18545 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
PDE6GP18545 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
PDE6GP18545 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
PDE6GP18545 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC13.15□□□□□ -0.31
PDE6GP18545 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
PDE6GP18545 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PDE6GP18545 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
PDE6GP18545 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.14□□□□□ -0.31
PDE6GP18545 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
PDE6GP18545 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms