Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DOBP13765 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.07■□□□□ 0.64
HLA-DOBP13765 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DOBP13765 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DOBP13765 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DOBP13765 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DOBP13765 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DOBP13765 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HLA-DOBP13765 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DOBP13765 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.06■□□□□ 0.64
HLA-DOBP13765 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-DOBP13765 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DOBP13765 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DOBP13765 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-DOBP13765 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HLA-DOBP13765 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-DOBP13765 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DOBP13765 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-DOBP13765 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DOBP13765 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DOBP13765 BX005040.4-201ENST00000637145 1518 ntBASIC19.05■□□□□ 0.64
HLA-DOBP13765 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DOBP13765 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-DOBP13765 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-DOBP13765 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
HLA-DOBP13765 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.05■□□□□ 0.64
HLA-DOBP13765 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DOBP13765 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HLA-DOBP13765 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
HLA-DOBP13765 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DOBP13765 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DOBP13765 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DOBP13765 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DOBP13765 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-DOBP13765 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOBP13765 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOBP13765 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOBP13765 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-DOBP13765 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOBP13765 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DOBP13765 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
HLA-DOBP13765 AC012414.1-201ENST00000556676 535 ntBASIC19.04■□□□□ 0.64
HLA-DOBP13765 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOBP13765 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOBP13765 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOBP13765 Z98882.1-201ENST00000622160 2253 ntBASIC19.03■□□□□ 0.64
HLA-DOBP13765 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOBP13765 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
HLA-DOBP13765 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOBP13765 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DOBP13765 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.03■□□□□ 0.64
HLA-DOBP13765 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.03■□□□□ 0.64
HLA-DOBP13765 MIR6084-201ENST00000622012 110 ntBASIC19.03■□□□□ 0.64
HLA-DOBP13765 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOBP13765 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOBP13765 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOBP13765 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
HLA-DOBP13765 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOBP13765 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.03■□□□□ 0.64
HLA-DOBP13765 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DOBP13765 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DOBP13765 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DOBP13765 AC009237.3-201ENST00000393279 1427 ntBASIC19.02■□□□□ 0.64
HLA-DOBP13765 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOBP13765 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DOBP13765 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DOBP13765 IRS3P-201ENST00000223076 1006 ntBASIC19.02■□□□□ 0.64
HLA-DOBP13765 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.02■□□□□ 0.64
HLA-DOBP13765 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.02■□□□□ 0.64
HLA-DOBP13765 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DOBP13765 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DOBP13765 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DOBP13765 AC104564.3-201ENST00000582367 638 ntBASIC19.02■□□□□ 0.64
HLA-DOBP13765 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HLA-DOBP13765 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HLA-DOBP13765 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DOBP13765 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DOBP13765 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
HLA-DOBP13765 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.02■□□□□ 0.63
HLA-DOBP13765 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOBP13765 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOBP13765 AC005224.4-201ENST00000583262 1652 ntBASIC19.01■□□□□ 0.63
HLA-DOBP13765 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DOBP13765 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOBP13765 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOBP13765 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOBP13765 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DOBP13765 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOBP13765 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.01■□□□□ 0.63
HLA-DOBP13765 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.01■□□□□ 0.63
HLA-DOBP13765 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.01■□□□□ 0.63
HLA-DOBP13765 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DOBP13765 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DOBP13765 AC055733.4-201ENST00000638462 1354 ntBASIC19.01■□□□□ 0.63
HLA-DOBP13765 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
HLA-DOBP13765 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DOBP13765 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DOBP13765 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DOBP13765 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DOBP13765 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms