Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RETP07949 MIPEPP3-201ENST00000412105 444 ntBASIC21.49■■□□□ 1.03
RETP07949 GCSHP5-201ENST00000443090 522 ntBASIC21.49■■□□□ 1.03
RETP07949 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.49■■□□□ 1.03
RETP07949 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.49■■□□□ 1.03
RETP07949 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RETP07949 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RETP07949 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETP07949 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETP07949 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RETP07949 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
RETP07949 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETP07949 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
RETP07949 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.49■■□□□ 1.03
RETP07949 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.48■■□□□ 1.03
RETP07949 CLDN5-201ENST00000403084 2357 ntBASIC21.48■■□□□ 1.03
RETP07949 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RETP07949 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETP07949 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETP07949 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETP07949 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RETP07949 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.48■■□□□ 1.03
RETP07949 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RETP07949 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
RETP07949 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
RETP07949 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
RETP07949 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
RETP07949 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.48■■□□□ 1.03
RETP07949 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RETP07949 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETP07949 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETP07949 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETP07949 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETP07949 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC21.47■■□□□ 1.03
RETP07949 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
RETP07949 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.47■■□□□ 1.03
RETP07949 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
RETP07949 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.47■■□□□ 1.03
RETP07949 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RETP07949 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RETP07949 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
RETP07949 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.46■■□□□ 1.03
RETP07949 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETP07949 AL596275.1-201ENST00000423464 877 ntBASIC21.46■■□□□ 1.03
RETP07949 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC21.46■■□□□ 1.03
RETP07949 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RETP07949 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
RETP07949 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
RETP07949 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.46■■□□□ 1.03
RETP07949 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RETP07949 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETP07949 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
RETP07949 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RETP07949 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RETP07949 MKRN4P-201ENST00000444706 1521 ntBASIC21.45■■□□□ 1.02
RETP07949 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.45■■□□□ 1.02
RETP07949 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
RETP07949 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RETP07949 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.45■■□□□ 1.02
RETP07949 RPS2P4-201ENST00000476944 856 ntBASIC21.45■■□□□ 1.02
RETP07949 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.45■■□□□ 1.02
RETP07949 RARRES2P4-201ENST00000514074 484 ntBASIC21.45■■□□□ 1.02
RETP07949 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.45■■□□□ 1.02
RETP07949 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RETP07949 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RETP07949 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RETP07949 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RETP07949 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.45■■□□□ 1.02
RETP07949 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETP07949 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETP07949 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
RETP07949 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETP07949 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RETP07949 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.44■■□□□ 1.02
RETP07949 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.44■■□□□ 1.02
RETP07949 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.44■■□□□ 1.02
RETP07949 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.44■■□□□ 1.02
RETP07949 KRT18P20-201ENST00000548986 1279 ntBASIC21.44■■□□□ 1.02
RETP07949 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.44■■□□□ 1.02
RETP07949 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.44■■□□□ 1.02
RETP07949 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.44■■□□□ 1.02
RETP07949 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.44■■□□□ 1.02
RETP07949 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RETP07949 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
RETP07949 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.44■■□□□ 1.02
RETP07949 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETP07949 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
RETP07949 ESRRAP1-201ENST00000400596 1257 ntBASIC21.43■■□□□ 1.02
RETP07949 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.43■■□□□ 1.02
RETP07949 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.43■■□□□ 1.02
RETP07949 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.43■■□□□ 1.02
RETP07949 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.43■■□□□ 1.02
RETP07949 AC013268.1-206ENST00000638368 961 ntBASIC21.43■■□□□ 1.02
RETP07949 AC112229.1-201ENST00000639295 961 ntBASIC21.43■■□□□ 1.02
RETP07949 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETP07949 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.43■■□□□ 1.02
RETP07949 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETP07949 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETP07949 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RETP07949 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms