Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TGFAP01135 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TGFAP01135 AC098934.4-201ENST00000564127 592 ntBASIC17.53■□□□□ 0.4
TGFAP01135 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.53■□□□□ 0.4
TGFAP01135 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.53■□□□□ 0.4
TGFAP01135 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.53■□□□□ 0.4
TGFAP01135 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TGFAP01135 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TGFAP01135 AC068338.2-201ENST00000563278 1430 ntBASIC17.53■□□□□ 0.4
TGFAP01135 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TGFAP01135 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TGFAP01135 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TGFAP01135 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
TGFAP01135 AP006587.3-201ENST00000525742 1516 ntBASIC17.52■□□□□ 0.4
TGFAP01135 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TGFAP01135 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TGFAP01135 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TGFAP01135 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TGFAP01135 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TGFAP01135 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TGFAP01135 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TGFAP01135 CYP2T1P-201ENST00000432607 1285 ntBASIC17.52■□□□□ 0.4
TGFAP01135 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TGFAP01135 RNA5SP413-201ENST00000516373 109 ntBASIC17.52■□□□□ 0.4
TGFAP01135 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.52■□□□□ 0.4
TGFAP01135 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
TGFAP01135 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.52■□□□□ 0.4
TGFAP01135 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
TGFAP01135 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TGFAP01135 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TGFAP01135 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TGFAP01135 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
TGFAP01135 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.51■□□□□ 0.39
TGFAP01135 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TGFAP01135 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TGFAP01135 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TGFAP01135 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.51■□□□□ 0.39
TGFAP01135 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TGFAP01135 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.51■□□□□ 0.39
TGFAP01135 MIPEPP3-201ENST00000412105 444 ntBASIC17.51■□□□□ 0.39
TGFAP01135 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
TGFAP01135 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TGFAP01135 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.51■□□□□ 0.39
TGFAP01135 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TGFAP01135 AC069236.1-201ENST00000604339 616 ntBASIC17.51■□□□□ 0.39
TGFAP01135 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.51■□□□□ 0.39
TGFAP01135 AC008175.2-201ENST00000612840 297 ntBASIC17.51■□□□□ 0.39
TGFAP01135 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TGFAP01135 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TGFAP01135 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TGFAP01135 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.51■□□□□ 0.39
TGFAP01135 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TGFAP01135 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
TGFAP01135 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TGFAP01135 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TGFAP01135 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TGFAP01135 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.5■□□□□ 0.39
TGFAP01135 OR10C1-204ENST00000622521 1039 ntBASIC17.5■□□□□ 0.39
TGFAP01135 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TGFAP01135 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TGFAP01135 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
TGFAP01135 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
TGFAP01135 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
TGFAP01135 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TGFAP01135 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TGFAP01135 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.49■□□□□ 0.39
TGFAP01135 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.49■□□□□ 0.39
TGFAP01135 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TGFAP01135 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.49■□□□□ 0.39
TGFAP01135 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TGFAP01135 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
TGFAP01135 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.49■□□□□ 0.39
TGFAP01135 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.49■□□□□ 0.39
TGFAP01135 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TGFAP01135 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TGFAP01135 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
TGFAP01135 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TGFAP01135 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
TGFAP01135 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TGFAP01135 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.48■□□□□ 0.39
TGFAP01135 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TGFAP01135 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.48■□□□□ 0.39
TGFAP01135 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TGFAP01135 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TGFAP01135 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
TGFAP01135 KRT18P29-201ENST00000397031 1267 ntBASIC17.48■□□□□ 0.39
TGFAP01135 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TGFAP01135 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
TGFAP01135 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.48■□□□□ 0.39
TGFAP01135 POU5F1P3-201ENST00000428824 1078 ntBASIC17.48■□□□□ 0.39
TGFAP01135 AC007322.4-201ENST00000509611 723 ntBASIC17.48■□□□□ 0.39
TGFAP01135 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TGFAP01135 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.48■□□□□ 0.39
TGFAP01135 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TGFAP01135 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.47■□□□□ 0.39
TGFAP01135 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TGFAP01135 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TGFAP01135 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TGFAP01135 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.47■□□□□ 0.39
TGFAP01135 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms