Protein–RNA interactions for Protein: O15079

SNPH, Syntaphilin, humanhuman

Predictions only

Length 494 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNPHO15079 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.94■□□□□ 0.78
SNPHO15079 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SNPHO15079 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNPHO15079 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNPHO15079 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.93■□□□□ 0.78
SNPHO15079 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.93■□□□□ 0.78
SNPHO15079 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNPHO15079 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNPHO15079 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.93■□□□□ 0.78
SNPHO15079 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNPHO15079 MIR572-201ENST00000384983 95 ntBASIC19.93■□□□□ 0.78
SNPHO15079 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNPHO15079 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNPHO15079 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.93■□□□□ 0.78
SNPHO15079 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNPHO15079 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNPHO15079 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.93■□□□□ 0.78
SNPHO15079 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.93■□□□□ 0.78
SNPHO15079 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SNPHO15079 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SNPHO15079 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNPHO15079 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNPHO15079 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.92■□□□□ 0.78
SNPHO15079 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SNPHO15079 AC010141.3-201ENST00000456659 717 ntBASIC19.92■□□□□ 0.78
SNPHO15079 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNPHO15079 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.92■□□□□ 0.78
SNPHO15079 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SNPHO15079 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
SNPHO15079 LINC01960-201ENST00000563759 1884 ntBASIC19.92■□□□□ 0.78
SNPHO15079 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
SNPHO15079 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SNPHO15079 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SNPHO15079 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SNPHO15079 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNPHO15079 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNPHO15079 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNPHO15079 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNPHO15079 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.91■□□□□ 0.78
SNPHO15079 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNPHO15079 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.91■□□□□ 0.78
SNPHO15079 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.91■□□□□ 0.78
SNPHO15079 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNPHO15079 AKR1B10P2-201ENST00000577332 927 ntBASIC19.91■□□□□ 0.78
SNPHO15079 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.91■□□□□ 0.78
SNPHO15079 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.91■□□□□ 0.78
SNPHO15079 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNPHO15079 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNPHO15079 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.91■□□□□ 0.78
SNPHO15079 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNPHO15079 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNPHO15079 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
SNPHO15079 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNPHO15079 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.9■□□□□ 0.78
SNPHO15079 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNPHO15079 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.9■□□□□ 0.78
SNPHO15079 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SNPHO15079 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
SNPHO15079 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNPHO15079 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SNPHO15079 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.89■□□□□ 0.78
SNPHO15079 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SNPHO15079 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNPHO15079 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNPHO15079 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNPHO15079 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNPHO15079 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
SNPHO15079 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNPHO15079 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNPHO15079 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
SNPHO15079 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNPHO15079 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNPHO15079 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SNPHO15079 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
SNPHO15079 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNPHO15079 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNPHO15079 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNPHO15079 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNPHO15079 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.89■□□□□ 0.77
SNPHO15079 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.89■□□□□ 0.77
SNPHO15079 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.89■□□□□ 0.77
SNPHO15079 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNPHO15079 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNPHO15079 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.88■□□□□ 0.77
SNPHO15079 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNPHO15079 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNPHO15079 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNPHO15079 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNPHO15079 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNPHO15079 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNPHO15079 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNPHO15079 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC19.88■□□□□ 0.77
SNPHO15079 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.88■□□□□ 0.77
SNPHO15079 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNPHO15079 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
SNPHO15079 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.88■□□□□ 0.77
SNPHO15079 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNPHO15079 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.88■□□□□ 0.77
SNPHO15079 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNPHO15079 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms