Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SDHDO14521 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDHDO14521 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDHDO14521 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
SDHDO14521 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.57■□□□□ 0.88
SDHDO14521 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SDHDO14521 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SDHDO14521 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.56■□□□□ 0.88
SDHDO14521 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDHDO14521 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SDHDO14521 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.56■□□□□ 0.88
SDHDO14521 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDHDO14521 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SDHDO14521 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDHDO14521 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.56■□□□□ 0.88
SDHDO14521 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDHDO14521 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SDHDO14521 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SDHDO14521 FEM1AP1-201ENST00000431297 1995 ntBASIC20.55■□□□□ 0.88
SDHDO14521 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDHDO14521 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SDHDO14521 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.55■□□□□ 0.88
SDHDO14521 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SDHDO14521 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDHDO14521 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.55■□□□□ 0.88
SDHDO14521 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDHDO14521 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
SDHDO14521 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDHDO14521 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SDHDO14521 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDHDO14521 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDHDO14521 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDHDO14521 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDHDO14521 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDHDO14521 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDHDO14521 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SDHDO14521 KRT16P3-201ENST00000439127 1283 ntBASIC20.54■□□□□ 0.88
SDHDO14521 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDHDO14521 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.54■□□□□ 0.88
SDHDO14521 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDHDO14521 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDHDO14521 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDHDO14521 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDHDO14521 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDHDO14521 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SDHDO14521 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SDHDO14521 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.53■□□□□ 0.88
SDHDO14521 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDHDO14521 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDHDO14521 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.53■□□□□ 0.88
SDHDO14521 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDHDO14521 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.53■□□□□ 0.88
SDHDO14521 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.53■□□□□ 0.88
SDHDO14521 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SDHDO14521 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
SDHDO14521 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDHDO14521 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SDHDO14521 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.53■□□□□ 0.88
SDHDO14521 AL034346.1-201ENST00000568244 1277 ntBASIC20.53■□□□□ 0.88
SDHDO14521 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.53■□□□□ 0.88
SDHDO14521 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.53■□□□□ 0.88
SDHDO14521 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDHDO14521 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.53■□□□□ 0.88
SDHDO14521 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDHDO14521 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDHDO14521 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SDHDO14521 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDHDO14521 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.52■□□□□ 0.88
SDHDO14521 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDHDO14521 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SDHDO14521 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDHDO14521 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SDHDO14521 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SDHDO14521 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.52■□□□□ 0.88
SDHDO14521 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.52■□□□□ 0.88
SDHDO14521 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SDHDO14521 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SDHDO14521 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SDHDO14521 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
SDHDO14521 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SDHDO14521 AP004607.7-201ENST00000527152 1677 ntBASIC20.51■□□□□ 0.87
SDHDO14521 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SDHDO14521 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SDHDO14521 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDHDO14521 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.51■□□□□ 0.87
SDHDO14521 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDHDO14521 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SDHDO14521 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SDHDO14521 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDHDO14521 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDHDO14521 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDHDO14521 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDHDO14521 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDHDO14521 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDHDO14521 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDHDO14521 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDHDO14521 AL356740.2-201ENST00000601559 647 ntBASIC20.5■□□□□ 0.87
SDHDO14521 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SDHDO14521 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SDHDO14521 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms