Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK2O00526 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UPK2O00526 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK2O00526 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK2O00526 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
UPK2O00526 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK2O00526 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.04■□□□□ 0.32
UPK2O00526 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK2O00526 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC17.04■□□□□ 0.32
UPK2O00526 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.04■□□□□ 0.32
UPK2O00526 BX842568.3-201ENST00000418104 571 ntBASIC17.04■□□□□ 0.32
UPK2O00526 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.04■□□□□ 0.32
UPK2O00526 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.04■□□□□ 0.32
UPK2O00526 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.04■□□□□ 0.32
UPK2O00526 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.04■□□□□ 0.32
UPK2O00526 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
UPK2O00526 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.04■□□□□ 0.32
UPK2O00526 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.04■□□□□ 0.32
UPK2O00526 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.04■□□□□ 0.32
UPK2O00526 AL024507.2-201ENST00000606070 2574 ntBASIC17.04■□□□□ 0.32
UPK2O00526 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.04■□□□□ 0.32
UPK2O00526 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK2O00526 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK2O00526 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
UPK2O00526 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
UPK2O00526 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK2O00526 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UPK2O00526 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
UPK2O00526 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK2O00526 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK2O00526 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
UPK2O00526 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK2O00526 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC17.03■□□□□ 0.32
UPK2O00526 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.03■□□□□ 0.32
UPK2O00526 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.03■□□□□ 0.32
UPK2O00526 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK2O00526 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK2O00526 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK2O00526 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
UPK2O00526 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
UPK2O00526 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
UPK2O00526 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK2O00526 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
UPK2O00526 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK2O00526 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK2O00526 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK2O00526 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK2O00526 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UPK2O00526 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UPK2O00526 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK2O00526 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK2O00526 AP006587.3-201ENST00000525742 1516 ntBASIC17.02■□□□□ 0.32
UPK2O00526 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UPK2O00526 UNC93B3-201ENST00000308076 687 ntBASIC17.02■□□□□ 0.32
UPK2O00526 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK2O00526 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.02■□□□□ 0.32
UPK2O00526 MIR4767-201ENST00000582827 78 ntBASIC17.02■□□□□ 0.32
UPK2O00526 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.02■□□□□ 0.32
UPK2O00526 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.02■□□□□ 0.31
UPK2O00526 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.02■□□□□ 0.31
UPK2O00526 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPK2O00526 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
UPK2O00526 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPK2O00526 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.02■□□□□ 0.31
UPK2O00526 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPK2O00526 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
UPK2O00526 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
UPK2O00526 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.01■□□□□ 0.31
UPK2O00526 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.01■□□□□ 0.31
UPK2O00526 SMUG1P1-201ENST00000590640 811 ntBASIC17.01■□□□□ 0.31
UPK2O00526 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
UPK2O00526 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.01■□□□□ 0.31
UPK2O00526 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.01■□□□□ 0.31
UPK2O00526 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.01■□□□□ 0.31
UPK2O00526 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPK2O00526 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
UPK2O00526 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
UPK2O00526 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK2O00526 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK2O00526 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17■□□□□ 0.31
UPK2O00526 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17■□□□□ 0.31
UPK2O00526 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
UPK2O00526 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
UPK2O00526 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms