Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CCDC162PA2VCL2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.28■■□□□ 1
CCDC162PA2VCL2 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CCDC162PA2VCL2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.28■■□□□ 1
CCDC162PA2VCL2 AC012414.1-201ENST00000556676 535 ntBASIC21.28■■□□□ 1
CCDC162PA2VCL2 AC009237.3-201ENST00000393279 1427 ntBASIC21.28■■□□□ 1
CCDC162PA2VCL2 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC162PA2VCL2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.27■■□□□ 1
CCDC162PA2VCL2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC162PA2VCL2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC162PA2VCL2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CCDC162PA2VCL2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC162PA2VCL2 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.27■■□□□ 1
CCDC162PA2VCL2 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CCDC162PA2VCL2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CCDC162PA2VCL2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.27■■□□□ 1
CCDC162PA2VCL2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.27■■□□□ 1
CCDC162PA2VCL2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.27■■□□□ 1
CCDC162PA2VCL2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.27■■□□□ 1
CCDC162PA2VCL2 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.27■■□□□ 1
CCDC162PA2VCL2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.27■■□□□ 1
CCDC162PA2VCL2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.27■■□□□ 1
CCDC162PA2VCL2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.27■■□□□ 1
CCDC162PA2VCL2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.27■■□□□ 1
CCDC162PA2VCL2 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
CCDC162PA2VCL2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.27■□□□□ 0.99
CCDC162PA2VCL2 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
CCDC162PA2VCL2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC162PA2VCL2 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.26■□□□□ 0.99
CCDC162PA2VCL2 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC162PA2VCL2 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC162PA2VCL2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC162PA2VCL2 AC026310.3-201ENST00000625186 2373 ntBASIC21.26■□□□□ 0.99
CCDC162PA2VCL2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC162PA2VCL2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC162PA2VCL2 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC162PA2VCL2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CCDC162PA2VCL2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.26■□□□□ 0.99
CCDC162PA2VCL2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC162PA2VCL2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC162PA2VCL2 IRS3P-201ENST00000223076 1006 ntBASIC21.25■□□□□ 0.99
CCDC162PA2VCL2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC162PA2VCL2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC162PA2VCL2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CCDC162PA2VCL2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC162PA2VCL2 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.25■□□□□ 0.99
CCDC162PA2VCL2 AL354811.1-201ENST00000610286 706 ntBASIC21.25■□□□□ 0.99
CCDC162PA2VCL2 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CCDC162PA2VCL2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 AC005224.4-201ENST00000583262 1652 ntBASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 AC055733.4-201ENST00000638462 1354 ntBASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 MIR6084-201ENST00000622012 110 ntBASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 Z98882.1-201ENST00000622160 2253 ntBASIC21.24■□□□□ 0.99
CCDC162PA2VCL2 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC162PA2VCL2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CCDC162PA2VCL2 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC162PA2VCL2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
CCDC162PA2VCL2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.23■□□□□ 0.99
CCDC162PA2VCL2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC162PA2VCL2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.23■□□□□ 0.99
CCDC162PA2VCL2 AL358852.1-201ENST00000623174 1268 ntBASIC21.23■□□□□ 0.99
CCDC162PA2VCL2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC162PA2VCL2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.23■□□□□ 0.99
CCDC162PA2VCL2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CCDC162PA2VCL2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC162PA2VCL2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
CCDC162PA2VCL2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC162PA2VCL2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC162PA2VCL2 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC162PA2VCL2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.22■□□□□ 0.99
CCDC162PA2VCL2 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC162PA2VCL2 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC162PA2VCL2 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC162PA2VCL2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC162PA2VCL2 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.22■□□□□ 0.99
CCDC162PA2VCL2 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC162PA2VCL2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CCDC162PA2VCL2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CCDC162PA2VCL2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CCDC162PA2VCL2 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC162PA2VCL2 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.21■□□□□ 0.99
CCDC162PA2VCL2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC162PA2VCL2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC162PA2VCL2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CCDC162PA2VCL2 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms