Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
IGHV4-28A0A0C4DH34 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
IGHV4-28A0A0C4DH34 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.35■□□□□ 0.05
IGHV4-28A0A0C4DH34 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
IGHV4-28A0A0C4DH34 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IGHV4-28A0A0C4DH34 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.05
IGHV4-28A0A0C4DH34 AC092053.2-201ENST00000640557 1818 ntBASIC15.33■□□□□ 0.05
IGHV4-28A0A0C4DH34 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
IGHV4-28A0A0C4DH34 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IGHV4-28A0A0C4DH34 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.33■□□□□ 0.05
IGHV4-28A0A0C4DH34 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.05
IGHV4-28A0A0C4DH34 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IGHV4-28A0A0C4DH34 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IGHV4-28A0A0C4DH34 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 HSCB-202ENST00000398941 955 ntTSL 2 BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 AC079834.2-201ENST00000609776 1949 ntBASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IGHV4-28A0A0C4DH34 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.32■□□□□ 0.04
IGHV4-28A0A0C4DH34 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms