Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC29.35■■■□□ 2.29
NINLQ9Y2I6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC29.35■■■□□ 2.29
NINLQ9Y2I6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
NINLQ9Y2I6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC29.35■■■□□ 2.29
NINLQ9Y2I6 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC29.34■■■□□ 2.29
NINLQ9Y2I6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC29.34■■■□□ 2.29
NINLQ9Y2I6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC29.34■■■□□ 2.29
NINLQ9Y2I6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
NINLQ9Y2I6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC29.34■■■□□ 2.29
NINLQ9Y2I6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC29.34■■■□□ 2.29
NINLQ9Y2I6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.34■■■□□ 2.29
NINLQ9Y2I6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC29.34■■■□□ 2.29
NINLQ9Y2I6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 AC006970.2-201ENST00000450065 779 ntBASIC29.33■■■□□ 2.29
NINLQ9Y2I6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC29.33■■■□□ 2.29
NINLQ9Y2I6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC29.33■■■□□ 2.28
NINLQ9Y2I6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC29.32■■■□□ 2.28
NINLQ9Y2I6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
NINLQ9Y2I6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC29.32■■■□□ 2.28
NINLQ9Y2I6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC29.32■■■□□ 2.28
NINLQ9Y2I6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC29.32■■■□□ 2.28
NINLQ9Y2I6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC29.32■■■□□ 2.28
NINLQ9Y2I6 AC068473.5-201ENST00000616428 2072 ntBASIC29.32■■■□□ 2.28
NINLQ9Y2I6 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
NINLQ9Y2I6 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC29.31■■■□□ 2.28
NINLQ9Y2I6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC29.31■■■□□ 2.28
NINLQ9Y2I6 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
NINLQ9Y2I6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
NINLQ9Y2I6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC29.31■■■□□ 2.28
NINLQ9Y2I6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC29.31■■■□□ 2.28
NINLQ9Y2I6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC29.31■■■□□ 2.28
NINLQ9Y2I6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC29.31■■■□□ 2.28
NINLQ9Y2I6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC29.31■■■□□ 2.28
NINLQ9Y2I6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC29.31■■■□□ 2.28
NINLQ9Y2I6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
NINLQ9Y2I6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC29.31■■■□□ 2.28
NINLQ9Y2I6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC29.31■■■□□ 2.28
NINLQ9Y2I6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
NINLQ9Y2I6 NCF1B-203ENST00000435988 1254 ntBASIC29.3■■■□□ 2.28
NINLQ9Y2I6 CNN2P6-201ENST00000439038 900 ntBASIC29.3■■■□□ 2.28
NINLQ9Y2I6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC29.3■■■□□ 2.28
NINLQ9Y2I6 AC010536.3-201ENST00000620306 533 ntBASIC29.3■■■□□ 2.28
NINLQ9Y2I6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
NINLQ9Y2I6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
NINLQ9Y2I6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
NINLQ9Y2I6 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC29.3■■■□□ 2.28
NINLQ9Y2I6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC29.3■■■□□ 2.28
NINLQ9Y2I6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC29.29■■■□□ 2.28
NINLQ9Y2I6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
NINLQ9Y2I6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
NINLQ9Y2I6 UQCRFS1P1-201ENST00000435169 820 ntBASIC29.29■■■□□ 2.28
NINLQ9Y2I6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC29.29■■■□□ 2.28
NINLQ9Y2I6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
NINLQ9Y2I6 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
NINLQ9Y2I6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
NINLQ9Y2I6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
NINLQ9Y2I6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC29.29■■■□□ 2.28
NINLQ9Y2I6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
NINLQ9Y2I6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC29.29■■■□□ 2.28
NINLQ9Y2I6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC29.29■■■□□ 2.28
NINLQ9Y2I6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
NINLQ9Y2I6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
NINLQ9Y2I6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
NINLQ9Y2I6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC29.28■■■□□ 2.28
NINLQ9Y2I6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC29.28■■■□□ 2.28
NINLQ9Y2I6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC29.28■■■□□ 2.28
NINLQ9Y2I6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC29.28■■■□□ 2.28
NINLQ9Y2I6 AL050303.2-201ENST00000619798 666 ntBASIC29.28■■■□□ 2.28
NINLQ9Y2I6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC29.28■■■□□ 2.28
NINLQ9Y2I6 AC092053.2-201ENST00000640557 1818 ntBASIC29.28■■■□□ 2.28
NINLQ9Y2I6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
NINLQ9Y2I6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC29.28■■■□□ 2.28
NINLQ9Y2I6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NINLQ9Y2I6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
NINLQ9Y2I6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
NINLQ9Y2I6 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NINLQ9Y2I6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
NINLQ9Y2I6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC29.28■■■□□ 2.28
NINLQ9Y2I6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
NINLQ9Y2I6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC29.27■■■□□ 2.28
NINLQ9Y2I6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
NINLQ9Y2I6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
NINLQ9Y2I6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC29.27■■■□□ 2.28
NINLQ9Y2I6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC29.27■■■□□ 2.28
NINLQ9Y2I6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC29.27■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms