Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF6Q9Y252 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF6Q9Y252 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF6Q9Y252 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF6Q9Y252 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF6Q9Y252 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF6Q9Y252 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF6Q9Y252 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF6Q9Y252 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.97■□□□□ 0.79
RNF6Q9Y252 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF6Q9Y252 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF6Q9Y252 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF6Q9Y252 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF6Q9Y252 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF6Q9Y252 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
RNF6Q9Y252 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF6Q9Y252 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
RNF6Q9Y252 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF6Q9Y252 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF6Q9Y252 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF6Q9Y252 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF6Q9Y252 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF6Q9Y252 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF6Q9Y252 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF6Q9Y252 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF6Q9Y252 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF6Q9Y252 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF6Q9Y252 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF6Q9Y252 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF6Q9Y252 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF6Q9Y252 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF6Q9Y252 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF6Q9Y252 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF6Q9Y252 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF6Q9Y252 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RNF6Q9Y252 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF6Q9Y252 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF6Q9Y252 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF6Q9Y252 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF6Q9Y252 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF6Q9Y252 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RNF6Q9Y252 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF6Q9Y252 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RNF6Q9Y252 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF6Q9Y252 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF6Q9Y252 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF6Q9Y252 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RNF6Q9Y252 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF6Q9Y252 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
RNF6Q9Y252 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF6Q9Y252 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF6Q9Y252 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF6Q9Y252 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF6Q9Y252 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RNF6Q9Y252 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF6Q9Y252 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF6Q9Y252 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF6Q9Y252 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RNF6Q9Y252 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.95■□□□□ 0.78
RNF6Q9Y252 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.95■□□□□ 0.78
RNF6Q9Y252 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
RNF6Q9Y252 TSPY26P-201ENST00000476365 1326 ntBASIC19.95■□□□□ 0.78
RNF6Q9Y252 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RNF6Q9Y252 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF6Q9Y252 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.95■□□□□ 0.78
RNF6Q9Y252 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RNF6Q9Y252 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.94■□□□□ 0.78
RNF6Q9Y252 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF6Q9Y252 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF6Q9Y252 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF6Q9Y252 AC034268.1-201ENST00000441047 882 ntBASIC19.94■□□□□ 0.78
RNF6Q9Y252 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.94■□□□□ 0.78
RNF6Q9Y252 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RNF6Q9Y252 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RNF6Q9Y252 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF6Q9Y252 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF6Q9Y252 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF6Q9Y252 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF6Q9Y252 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF6Q9Y252 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF6Q9Y252 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF6Q9Y252 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF6Q9Y252 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF6Q9Y252 SLC47A1P1-202ENST00000449666 945 ntBASIC19.93■□□□□ 0.78
RNF6Q9Y252 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.93■□□□□ 0.78
RNF6Q9Y252 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.93■□□□□ 0.78
RNF6Q9Y252 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF6Q9Y252 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF6Q9Y252 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF6Q9Y252 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF6Q9Y252 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.93■□□□□ 0.78
RNF6Q9Y252 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF6Q9Y252 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF6Q9Y252 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
RNF6Q9Y252 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.93■□□□□ 0.78
RNF6Q9Y252 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF6Q9Y252 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF6Q9Y252 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
RNF6Q9Y252 AC244015.2-201ENST00000616358 1861 ntBASIC19.92■□□□□ 0.78
RNF6Q9Y252 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms