Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.39■□□□□ 0.21
NOTCH3Q9UM47 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.39■□□□□ 0.21
NOTCH3Q9UM47 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.39■□□□□ 0.21
NOTCH3Q9UM47 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH3Q9UM47 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
NOTCH3Q9UM47 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
NOTCH3Q9UM47 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
NOTCH3Q9UM47 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH3Q9UM47 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH3Q9UM47 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH3Q9UM47 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH3Q9UM47 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH3Q9UM47 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
NOTCH3Q9UM47 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH3Q9UM47 MFF-207ENST00000409565 1548 ntTSL 2 BASIC16.38■□□□□ 0.21
NOTCH3Q9UM47 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.38■□□□□ 0.21
NOTCH3Q9UM47 AP001160.3-201ENST00000601484 763 ntBASIC16.38■□□□□ 0.21
NOTCH3Q9UM47 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH3Q9UM47 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH3Q9UM47 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH3Q9UM47 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
NOTCH3Q9UM47 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 AC231657.2-201ENST00000624556 255 ntBASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
NOTCH3Q9UM47 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.36■□□□□ 0.21
NOTCH3Q9UM47 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NOTCH3Q9UM47 AC013268.1-206ENST00000638368 961 ntBASIC16.36■□□□□ 0.21
NOTCH3Q9UM47 AC112229.1-201ENST00000639295 961 ntBASIC16.36■□□□□ 0.21
NOTCH3Q9UM47 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.36■□□□□ 0.21
NOTCH3Q9UM47 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.36■□□□□ 0.21
NOTCH3Q9UM47 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
NOTCH3Q9UM47 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC16.36■□□□□ 0.21
NOTCH3Q9UM47 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NOTCH3Q9UM47 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
NOTCH3Q9UM47 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
NOTCH3Q9UM47 LINC01960-201ENST00000563759 1884 ntBASIC16.36■□□□□ 0.21
NOTCH3Q9UM47 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC16.36■□□□□ 0.21
NOTCH3Q9UM47 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
NOTCH3Q9UM47 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 AC133552.2-202ENST00000575694 574 ntBASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 AC010141.3-201ENST00000456659 717 ntBASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NOTCH3Q9UM47 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 DUSP8P5-201ENST00000422884 1815 ntBASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
NOTCH3Q9UM47 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NOTCH3Q9UM47 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NOTCH3Q9UM47 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
NOTCH3Q9UM47 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
NOTCH3Q9UM47 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NOTCH3Q9UM47 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
NOTCH3Q9UM47 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NOTCH3Q9UM47 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NOTCH3Q9UM47 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
NOTCH3Q9UM47 DUSP8P3-201ENST00000399571 1760 ntBASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms