Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COMMD3Q9UBI1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 AC004687.1-201ENST00000579003 1625 ntBASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
COMMD3Q9UBI1 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 PCDHAC2-203ENST00000615316 3011 ntBASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
COMMD3Q9UBI1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
COMMD3Q9UBI1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3Q9UBI1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.7■□□□□ 0.58
COMMD3Q9UBI1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3Q9UBI1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3Q9UBI1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3Q9UBI1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3Q9UBI1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3Q9UBI1 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3Q9UBI1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
COMMD3Q9UBI1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3Q9UBI1 AC026471.6-201ENST00000622954 1905 ntBASIC18.7■□□□□ 0.58
COMMD3Q9UBI1 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3Q9UBI1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.7■□□□□ 0.58
COMMD3Q9UBI1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COMMD3Q9UBI1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 MIR4281-201ENST00000580852 62 ntBASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 AC104564.3-201ENST00000582367 638 ntBASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COMMD3Q9UBI1 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 OXCT2P1-201ENST00000447263 1535 ntBASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
COMMD3Q9UBI1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COMMD3Q9UBI1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms