Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
TFCP2L1Q9NZI6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC27.33■■□□□ 1.97
TFCP2L1Q9NZI6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
TFCP2L1Q9NZI6 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
TFCP2L1Q9NZI6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC27.33■■□□□ 1.97
TFCP2L1Q9NZI6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC27.33■■□□□ 1.97
TFCP2L1Q9NZI6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC27.33■■□□□ 1.97
TFCP2L1Q9NZI6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
TFCP2L1Q9NZI6 H19-210ENST00000439725 1929 ntTSL 2 BASIC27.32■■□□□ 1.96
TFCP2L1Q9NZI6 OR2A1-AS1-201ENST00000462305 773 ntBASIC27.32■■□□□ 1.96
TFCP2L1Q9NZI6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC27.32■■□□□ 1.96
TFCP2L1Q9NZI6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
TFCP2L1Q9NZI6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC27.32■■□□□ 1.96
TFCP2L1Q9NZI6 AC053503.5-201ENST00000601508 636 ntBASIC27.32■■□□□ 1.96
TFCP2L1Q9NZI6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC27.32■■□□□ 1.96
TFCP2L1Q9NZI6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.32■■□□□ 1.96
TFCP2L1Q9NZI6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
TFCP2L1Q9NZI6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TFCP2L1Q9NZI6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC27.32■■□□□ 1.96
TFCP2L1Q9NZI6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
TFCP2L1Q9NZI6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC27.31■■□□□ 1.96
TFCP2L1Q9NZI6 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TFCP2L1Q9NZI6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
TFCP2L1Q9NZI6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
TFCP2L1Q9NZI6 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC27.31■■□□□ 1.96
TFCP2L1Q9NZI6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC27.31■■□□□ 1.96
TFCP2L1Q9NZI6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
TFCP2L1Q9NZI6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
TFCP2L1Q9NZI6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
TFCP2L1Q9NZI6 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
TFCP2L1Q9NZI6 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
TFCP2L1Q9NZI6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.31■■□□□ 1.96
TFCP2L1Q9NZI6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC27.31■■□□□ 1.96
TFCP2L1Q9NZI6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC27.3■■□□□ 1.96
TFCP2L1Q9NZI6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
TFCP2L1Q9NZI6 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC27.3■■□□□ 1.96
TFCP2L1Q9NZI6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
TFCP2L1Q9NZI6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC27.3■■□□□ 1.96
TFCP2L1Q9NZI6 AL359736.2-201ENST00000621992 437 ntBASIC27.3■■□□□ 1.96
TFCP2L1Q9NZI6 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TFCP2L1Q9NZI6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TFCP2L1Q9NZI6 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
TFCP2L1Q9NZI6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
TFCP2L1Q9NZI6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
TFCP2L1Q9NZI6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC27.29■■□□□ 1.96
TFCP2L1Q9NZI6 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC27.29■■□□□ 1.96
TFCP2L1Q9NZI6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC27.29■■□□□ 1.96
TFCP2L1Q9NZI6 AC073912.3-201ENST00000624414 853 ntBASIC27.29■■□□□ 1.96
TFCP2L1Q9NZI6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC27.29■■□□□ 1.96
TFCP2L1Q9NZI6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC27.29■■□□□ 1.96
TFCP2L1Q9NZI6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
TFCP2L1Q9NZI6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC27.29■■□□□ 1.96
TFCP2L1Q9NZI6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC27.29■■□□□ 1.96
TFCP2L1Q9NZI6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
TFCP2L1Q9NZI6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
TFCP2L1Q9NZI6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TFCP2L1Q9NZI6 FAM210CP-201ENST00000445714 574 ntBASIC27.28■■□□□ 1.96
TFCP2L1Q9NZI6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC27.28■■□□□ 1.96
TFCP2L1Q9NZI6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC27.28■■□□□ 1.96
TFCP2L1Q9NZI6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC27.28■■□□□ 1.96
TFCP2L1Q9NZI6 AC079089.2-201ENST00000531211 1277 ntBASIC27.28■■□□□ 1.96
TFCP2L1Q9NZI6 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
TFCP2L1Q9NZI6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC27.28■■□□□ 1.96
TFCP2L1Q9NZI6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC27.28■■□□□ 1.96
TFCP2L1Q9NZI6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TFCP2L1Q9NZI6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC27.28■■□□□ 1.96
TFCP2L1Q9NZI6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
TFCP2L1Q9NZI6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC27.27■■□□□ 1.96
TFCP2L1Q9NZI6 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC27.27■■□□□ 1.96
TFCP2L1Q9NZI6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TFCP2L1Q9NZI6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC27.27■■□□□ 1.96
TFCP2L1Q9NZI6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TFCP2L1Q9NZI6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TFCP2L1Q9NZI6 MIR718-201ENST00000390190 70 ntBASIC27.27■■□□□ 1.96
TFCP2L1Q9NZI6 SERPINH1P1-201ENST00000419794 1249 ntBASIC27.27■■□□□ 1.96
TFCP2L1Q9NZI6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
TFCP2L1Q9NZI6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC27.27■■□□□ 1.96
TFCP2L1Q9NZI6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC27.27■■□□□ 1.96
TFCP2L1Q9NZI6 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC27.27■■□□□ 1.96
TFCP2L1Q9NZI6 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
TFCP2L1Q9NZI6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
TFCP2L1Q9NZI6 LINC01124-201ENST00000409786 2117 ntBASIC27.26■■□□□ 1.96
TFCP2L1Q9NZI6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 GXYLT1P3-201ENST00000453058 1193 ntBASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
TFCP2L1Q9NZI6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms