Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 AP005435.1-201ENST00000529293 1178 ntBASIC19.49■□□□□ 0.71
MRPL39Q9NYK5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.49■□□□□ 0.71
MRPL39Q9NYK5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.49■□□□□ 0.71
MRPL39Q9NYK5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
MRPL39Q9NYK5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.49■□□□□ 0.71
MRPL39Q9NYK5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
MRPL39Q9NYK5 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL39Q9NYK5 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.48■□□□□ 0.71
MRPL39Q9NYK5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL39Q9NYK5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.48■□□□□ 0.71
MRPL39Q9NYK5 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL39Q9NYK5 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL39Q9NYK5 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL39Q9NYK5 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL39Q9NYK5 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL39Q9NYK5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL39Q9NYK5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL39Q9NYK5 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
MRPL39Q9NYK5 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL39Q9NYK5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL39Q9NYK5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL39Q9NYK5 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.47■□□□□ 0.71
MRPL39Q9NYK5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL39Q9NYK5 MIR4767-201ENST00000582827 78 ntBASIC19.47■□□□□ 0.71
MRPL39Q9NYK5 AL136162.1-201ENST00000607711 1078 ntBASIC19.47■□□□□ 0.71
MRPL39Q9NYK5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
MRPL39Q9NYK5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
MRPL39Q9NYK5 AC138932.1-201ENST00000534164 6830 ntBASIC19.47■□□□□ 0.71
MRPL39Q9NYK5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
MRPL39Q9NYK5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.47■□□□□ 0.71
MRPL39Q9NYK5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL39Q9NYK5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.47■□□□□ 0.71
MRPL39Q9NYK5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPL39Q9NYK5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 AC024257.2-201ENST00000549699 147 ntBASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 AC135279.3-201ENST00000610945 1311 ntBASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 OXCT2P1-201ENST00000447263 1535 ntBASIC19.46■□□□□ 0.71
MRPL39Q9NYK5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRPL39Q9NYK5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
MRPL39Q9NYK5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRPL39Q9NYK5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MRPL39Q9NYK5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRPL39Q9NYK5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
MRPL39Q9NYK5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRPL39Q9NYK5 BX842568.3-201ENST00000418104 571 ntBASIC19.45■□□□□ 0.7
MRPL39Q9NYK5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.45■□□□□ 0.7
MRPL39Q9NYK5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.45■□□□□ 0.7
MRPL39Q9NYK5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MRPL39Q9NYK5 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.45■□□□□ 0.7
MRPL39Q9NYK5 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRPL39Q9NYK5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRPL39Q9NYK5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
MRPL39Q9NYK5 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 OR7E47P-201ENST00000546390 1422 ntBASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPL39Q9NYK5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL39Q9NYK5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL39Q9NYK5 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.43■□□□□ 0.7
MRPL39Q9NYK5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL39Q9NYK5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL39Q9NYK5 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL39Q9NYK5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.43■□□□□ 0.7
MRPL39Q9NYK5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.43■□□□□ 0.7
MRPL39Q9NYK5 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL39Q9NYK5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL39Q9NYK5 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL39Q9NYK5 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.43■□□□□ 0.7
MRPL39Q9NYK5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.43■□□□□ 0.7
MRPL39Q9NYK5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL39Q9NYK5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPL39Q9NYK5 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPL39Q9NYK5 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MRPL39Q9NYK5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPL39Q9NYK5 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPL39Q9NYK5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms