Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
THUMPD1Q9NXG2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THUMPD1Q9NXG2 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.02■□□□□ 0.8
THUMPD1Q9NXG2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.02■□□□□ 0.8
THUMPD1Q9NXG2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
THUMPD1Q9NXG2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THUMPD1Q9NXG2 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
THUMPD1Q9NXG2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.02■□□□□ 0.8
THUMPD1Q9NXG2 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
THUMPD1Q9NXG2 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
THUMPD1Q9NXG2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
THUMPD1Q9NXG2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
THUMPD1Q9NXG2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
THUMPD1Q9NXG2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
THUMPD1Q9NXG2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
THUMPD1Q9NXG2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
THUMPD1Q9NXG2 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
THUMPD1Q9NXG2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 AC010525.1-201ENST00000585559 441 ntBASIC20■□□□□ 0.79
THUMPD1Q9NXG2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 AC073130.3-201ENST00000624389 2278 ntBASIC20■□□□□ 0.79
THUMPD1Q9NXG2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
THUMPD1Q9NXG2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
THUMPD1Q9NXG2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
THUMPD1Q9NXG2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.99■□□□□ 0.79
THUMPD1Q9NXG2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.99■□□□□ 0.79
THUMPD1Q9NXG2 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.99■□□□□ 0.79
THUMPD1Q9NXG2 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
THUMPD1Q9NXG2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.99■□□□□ 0.79
THUMPD1Q9NXG2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.99■□□□□ 0.79
THUMPD1Q9NXG2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
THUMPD1Q9NXG2 MIR4466-201ENST00000606121 54 ntBASIC19.99■□□□□ 0.79
THUMPD1Q9NXG2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
THUMPD1Q9NXG2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
THUMPD1Q9NXG2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
THUMPD1Q9NXG2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
THUMPD1Q9NXG2 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
THUMPD1Q9NXG2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 AF106564.1-201ENST00000607058 2553 ntBASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
THUMPD1Q9NXG2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
THUMPD1Q9NXG2 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
THUMPD1Q9NXG2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
THUMPD1Q9NXG2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.97■□□□□ 0.79
THUMPD1Q9NXG2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
THUMPD1Q9NXG2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
THUMPD1Q9NXG2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
THUMPD1Q9NXG2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.97■□□□□ 0.79
THUMPD1Q9NXG2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.97■□□□□ 0.79
THUMPD1Q9NXG2 FEM1AP4-201ENST00000443167 1987 ntBASIC19.97■□□□□ 0.79
THUMPD1Q9NXG2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms