Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 ARHGEF2-207ENST00000465079 693 ntTSL 212.47□□□□□ -0.417e-8■■■■■ 27.8
XRN2Q9H0D6 EIF3B-212ENST00000494658 637 ntTSL 221.44■■□□□ 1.023e-6■■■■■ 27.8
XRN2Q9H0D6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.583e-6■■■■■ 27.8
XRN2Q9H0D6 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.373e-6■■■■■ 27.8
XRN2Q9H0D6 EIF3B-210ENST00000468611 1868 ntTSL 216.83■□□□□ 0.283e-6■■■■■ 27.8
XRN2Q9H0D6 EIF3B-207ENST00000465670 2766 ntTSL 213.92□□□□□ -0.183e-6■■■■■ 27.8
XRN2Q9H0D6 EIF3B-211ENST00000475415 3745 ntTSL 210.2□□□□□ -0.783e-6■■■■■ 27.8
XRN2Q9H0D6 ELF2-209ENST00000511184 1766 ntTSL 530.97■■■□□ 2.554e-7■■■■■ 27.8
XRN2Q9H0D6 ELF2-208ENST00000511006 1434 ntTSL 1 (best)28.06■■■□□ 2.084e-7■■■■■ 27.8
XRN2Q9H0D6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.114e-7■■■■■ 27.8
XRN2Q9H0D6 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.844e-7■■■■■ 27.7
XRN2Q9H0D6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.72■■□□□ 1.393e-9■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-207ENST00000435198 1056 ntTSL 331.83■■■□□ 2.691e-6■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-210ENST00000464036 1256 ntTSL 327.6■■■□□ 2.011e-6■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.942e-7■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-219ENST00000503294 814 ntTSL 425.78■■□□□ 1.721e-6■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-206ENST00000422076 643 ntTSL 525.78■■□□□ 1.721e-6■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.591e-6■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-214ENST00000473215 1028 ntTSL 324.84■■□□□ 1.571e-6■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-217ENST00000491779 611 ntTSL 222.69■■□□□ 1.221e-6■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-211ENST00000466752 886 ntTSL 322.69■■□□□ 1.221e-6■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-208ENST00000450390 2455 ntTSL 522.47■■□□□ 1.192e-7■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-220ENST00000509720 472 ntTSL 322.25■■□□□ 1.151e-6■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC22.06■■□□□ 1.121e-6■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.8■□□□□ 0.922e-7■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.21■□□□□ 0.831e-6■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-218ENST00000502382 530 ntTSL 419.24■□□□□ 0.671e-6■■■■■ 27.7
XRN2Q9H0D6 UBE2J2-215ENST00000477894 767 ntTSL 518.83■□□□□ 0.61e-6■■■■■ 27.7
XRN2Q9H0D6 CFL1-215ENST00000534784 737 ntTSL 321.91■■□□□ 1.14e-7■■■■■ 27.7
XRN2Q9H0D6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.29■□□□□ 0.844e-7■■■■■ 27.7
XRN2Q9H0D6 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.13■□□□□ 0.334e-7■■■■■ 27.7
XRN2Q9H0D6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC24.33■■□□□ 1.492e-7■■■■■ 27.7
XRN2Q9H0D6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.5■■□□□ 1.032e-7■■■■■ 27.7
XRN2Q9H0D6 C11orf95-203ENST00000445014 827 ntTSL 532.75■■■□□ 2.834e-6■■■■■ 27.6
XRN2Q9H0D6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.616e-7■■■■■ 27.6
XRN2Q9H0D6 TAF4-203ENST00000474089 532 ntTSL 223.42■■□□□ 1.342e-7■■■■■ 27.6
XRN2Q9H0D6 LCAT-206ENST00000573846 568 ntTSL 222.79■■□□□ 1.247e-13■■■■■ 27.6
XRN2Q9H0D6 RASA2-207ENST00000515549 494 ntTSL 421.62■■□□□ 1.057e-13■■■■■ 27.6
XRN2Q9H0D6 LCAT-207ENST00000575277 573 ntTSL 220.72■□□□□ 0.917e-13■■■■■ 27.6
XRN2Q9H0D6 MARS-212ENST00000548630 557 ntTSL 219.12■□□□□ 0.651e-30■■■■■ 27.6
XRN2Q9H0D6 LCAT-205ENST00000573538 1083 ntTSL 318.78■□□□□ 0.67e-13■■■■■ 27.6
XRN2Q9H0D6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.57e-13■■■■■ 27.6
XRN2Q9H0D6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.124e-6■■■■■ 27.6
XRN2Q9H0D6 LCAT-202ENST00000570369 348 ntTSL 215.15■□□□□ 0.027e-13■■■■■ 27.6
XRN2Q9H0D6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 04e-6■■■■■ 27.6
XRN2Q9H0D6 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.053e-6■■■■■ 27.6
XRN2Q9H0D6 ELMSAN1-205ENST00000435371 3839 ntTSL 1 (best)14.08□□□□□ -0.164e-6■■■■■ 27.6
XRN2Q9H0D6 RABGEF1-211ENST00000503687 4139 ntTSL 212.64□□□□□ -0.392e-8■■■■■ 27.6
XRN2Q9H0D6 TGFB1-203ENST00000598758 559 ntTSL 511.78□□□□□ -0.529e-7■■■■■ 27.6
XRN2Q9H0D6 ELMSAN1-211ENST00000486739 534 ntTSL 411.63□□□□□ -0.554e-6■■■■■ 27.6
XRN2Q9H0D6 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.977e-13■■■■■ 27.6
XRN2Q9H0D6 SHANK2-213ENST00000460048 736 ntTSL 519.59■□□□□ 0.731e-6■■■■■ 27.6
XRN2Q9H0D6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.783e-7■■■■■ 27.6
XRN2Q9H0D6 R3HDM2-208ENST00000448732 195 ntTSL 1 (best)28.18■■■□□ 2.14e-9■■■■■ 27.6
XRN2Q9H0D6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.014e-9■■■■■ 27.6
XRN2Q9H0D6 R3HDM2-215ENST00000634871 4092 ntTSL 5 BASIC14.09□□□□□ -0.154e-9■■■■■ 27.6
XRN2Q9H0D6 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.254e-9■■■■■ 27.6
XRN2Q9H0D6 SQSTM1-208ENST00000485412 656 ntTSL 217.09■□□□□ 0.335e-28■■■■■ 27.6
XRN2Q9H0D6 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC14.13□□□□□ -0.152e-7■■■■■ 27.6
XRN2Q9H0D6 SRRM2-222ENST00000575009 1146 ntTSL 530.81■■■□□ 2.521e-9■■■■■ 27.6
XRN2Q9H0D6 SRRM2-229ENST00000576894 2210 ntTSL 1 (best)20.72■□□□□ 0.911e-9■■■■■ 27.6
XRN2Q9H0D6 SRRM2-230ENST00000576924 3314 ntTSL 1 (best)16.44■□□□□ 0.221e-9■■■■■ 27.6
XRN2Q9H0D6 SRRM2-208ENST00000571378 2870 ntTSL 1 (best)14.84□□□□□ -0.031e-9■■■■■ 27.6
XRN2Q9H0D6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.55■□□□□ 0.722e-6■■■■■ 27.5
XRN2Q9H0D6 ANKMY1-219ENST00000464991 1221 ntTSL 1 (best)23.73■■□□□ 1.396e-7■■■■■ 27.5
XRN2Q9H0D6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.19■■□□□ 1.32e-7■■■■■ 27.5
XRN2Q9H0D6 FDXR-218ENST00000583881 1561 ntTSL 223.15■■□□□ 1.32e-7■■■■■ 27.5
XRN2Q9H0D6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC22.43■■□□□ 1.182e-7■■■■■ 27.5
XRN2Q9H0D6 FDXR-206ENST00000577509 1912 ntTSL 222.03■■□□□ 1.122e-7■■■■■ 27.5
XRN2Q9H0D6 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.82■□□□□ 0.922e-7■■■■■ 27.5
XRN2Q9H0D6 FDXR-208ENST00000578473 2482 ntTSL 1 (best)20.71■□□□□ 0.912e-7■■■■■ 27.5
XRN2Q9H0D6 FDXR-209ENST00000579482 2157 ntTSL 220.69■□□□□ 0.92e-7■■■■■ 27.5
XRN2Q9H0D6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.882e-7■■■■■ 27.5
XRN2Q9H0D6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.882e-7■■■■■ 27.5
XRN2Q9H0D6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.99■□□□□ 0.792e-7■■■■■ 27.5
XRN2Q9H0D6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.39■□□□□ 0.692e-7■■■■■ 27.5
XRN2Q9H0D6 ANKMY1-212ENST00000411765 652 ntTSL 419.29■□□□□ 0.686e-7■■■■■ 27.5
XRN2Q9H0D6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.06■□□□□ 0.642e-7■■■■■ 27.5
XRN2Q9H0D6 ANKMY1-218ENST00000462004 582 ntTSL 417.74■□□□□ 0.436e-7■■■■■ 27.5
XRN2Q9H0D6 ANKMY1-216ENST00000443318 565 ntTSL 316.94■□□□□ 0.36e-7■■■■■ 27.5
XRN2Q9H0D6 ANKMY1-224ENST00000496300 1569 ntTSL 516.17■□□□□ 0.186e-7■■■■■ 27.5
XRN2Q9H0D6 ANKMY1-222ENST00000484526 2969 ntTSL 215.85■□□□□ 0.136e-7■■■■■ 27.5
XRN2Q9H0D6 ANP32B-202ENST00000473205 687 ntTSL 315.43■□□□□ 0.064e-6■■■■■ 27.5
XRN2Q9H0D6 ANKMY1-215ENST00000441168 555 ntTSL 415.3■□□□□ 0.046e-7■■■■■ 27.5
XRN2Q9H0D6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.011e-6■■■■■ 27.5
XRN2Q9H0D6 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.031e-6■■■■■ 27.5
XRN2Q9H0D6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.081e-6■■■■■ 27.5
XRN2Q9H0D6 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.84□□□□□ -0.196e-7■■■■■ 27.5
XRN2Q9H0D6 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.41e-6■■■■■ 27.5
XRN2Q9H0D6 GREB1-210ENST00000628795 438 ntTSL 54.43□□□□□ -1.79e-10■■■■■ 27.5
XRN2Q9H0D6 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.382e-6■■■■■ 27.5
XRN2Q9H0D6 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC11.94□□□□□ -0.52e-6■■■■■ 27.5
XRN2Q9H0D6 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.532e-6■■■■■ 27.5
XRN2Q9H0D6 TBL1X-207ENST00000441088 520 ntTSL 37.5□□□□□ -1.212e-6■■■■■ 27.5
XRN2Q9H0D6 TBL1X-204ENST00000415293 565 ntTSL 57.5□□□□□ -1.212e-6■■■■■ 27.5
XRN2Q9H0D6 ZC3H11A-206ENST00000453771 1892 ntTSL 511.7□□□□□ -0.547e-15■■■■■ 27.4
XRN2Q9H0D6 ZC3H11A-208ENST00000466470 944 ntTSL 210.97□□□□□ -0.657e-15■■■■■ 27.4
XRN2Q9H0D6 ZC3H11A-205ENST00000432282 682 ntTSL 510.97□□□□□ -0.657e-15■■■■■ 27.4
XRN2Q9H0D6 ZC3H11A-207ENST00000461980 822 ntTSL 29.79□□□□□ -0.847e-15■■■■■ 27.4
XRN2Q9H0D6 ZC3H11A-211ENST00000492823 447 ntTSL 39.53□□□□□ -0.887e-15■■■■■ 27.4
Retrieved 100 of 21,068 protein–RNA pairs in 347.2 ms