Protein–RNA interactions for Protein: Q96K30

RITA1, RBPJ-interacting and tubulin-associated protein 1, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1Q96K30 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RITA1Q96K30 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.16■□□□□ 0.34
RITA1Q96K30 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.16■□□□□ 0.34
RITA1Q96K30 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RITA1Q96K30 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RITA1Q96K30 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RITA1Q96K30 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.15■□□□□ 0.34
RITA1Q96K30 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.15■□□□□ 0.34
RITA1Q96K30 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RITA1Q96K30 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.15■□□□□ 0.34
RITA1Q96K30 AL034346.1-201ENST00000568244 1277 ntBASIC17.15■□□□□ 0.34
RITA1Q96K30 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.15■□□□□ 0.34
RITA1Q96K30 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.15■□□□□ 0.34
RITA1Q96K30 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.15■□□□□ 0.34
RITA1Q96K30 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RITA1Q96K30 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.15■□□□□ 0.34
RITA1Q96K30 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RITA1Q96K30 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RITA1Q96K30 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RITA1Q96K30 AC026310.3-201ENST00000625186 2373 ntBASIC17.14■□□□□ 0.33
RITA1Q96K30 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.14■□□□□ 0.33
RITA1Q96K30 AL137060.1-201ENST00000618151 2648 ntBASIC17.14■□□□□ 0.33
RITA1Q96K30 IRS3P-201ENST00000223076 1006 ntBASIC17.14■□□□□ 0.33
RITA1Q96K30 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.14■□□□□ 0.33
RITA1Q96K30 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.14■□□□□ 0.33
RITA1Q96K30 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.14■□□□□ 0.33
RITA1Q96K30 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
RITA1Q96K30 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.14■□□□□ 0.33
RITA1Q96K30 MIR6084-201ENST00000622012 110 ntBASIC17.14■□□□□ 0.33
RITA1Q96K30 AP006587.3-201ENST00000525742 1516 ntBASIC17.14■□□□□ 0.33
RITA1Q96K30 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RITA1Q96K30 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RITA1Q96K30 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RITA1Q96K30 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RITA1Q96K30 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RITA1Q96K30 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RITA1Q96K30 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RITA1Q96K30 BX005040.4-201ENST00000637145 1518 ntBASIC17.13■□□□□ 0.33
RITA1Q96K30 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RITA1Q96K30 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.13■□□□□ 0.33
RITA1Q96K30 AC012414.1-201ENST00000556676 535 ntBASIC17.13■□□□□ 0.33
RITA1Q96K30 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.13■□□□□ 0.33
RITA1Q96K30 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RITA1Q96K30 AC244015.2-201ENST00000616358 1861 ntBASIC17.13■□□□□ 0.33
RITA1Q96K30 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.13■□□□□ 0.33
RITA1Q96K30 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RITA1Q96K30 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.13■□□□□ 0.33
RITA1Q96K30 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
RITA1Q96K30 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RITA1Q96K30 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RITA1Q96K30 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.12■□□□□ 0.33
RITA1Q96K30 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RITA1Q96K30 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.12■□□□□ 0.33
RITA1Q96K30 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RITA1Q96K30 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RITA1Q96K30 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.12■□□□□ 0.33
RITA1Q96K30 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RITA1Q96K30 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RITA1Q96K30 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RITA1Q96K30 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RITA1Q96K30 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RITA1Q96K30 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RITA1Q96K30 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
RITA1Q96K30 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.12■□□□□ 0.33
RITA1Q96K30 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RITA1Q96K30 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RITA1Q96K30 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RITA1Q96K30 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RITA1Q96K30 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RITA1Q96K30 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RITA1Q96K30 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RITA1Q96K30 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RITA1Q96K30 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RITA1Q96K30 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RITA1Q96K30 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.11■□□□□ 0.33
RITA1Q96K30 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.11■□□□□ 0.33
RITA1Q96K30 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RITA1Q96K30 ZNRF2P3-201ENST00000424200 374 ntBASIC17.11■□□□□ 0.33
RITA1Q96K30 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.11■□□□□ 0.33
RITA1Q96K30 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.11■□□□□ 0.33
RITA1Q96K30 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.11■□□□□ 0.33
RITA1Q96K30 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RITA1Q96K30 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RITA1Q96K30 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RITA1Q96K30 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RITA1Q96K30 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RITA1Q96K30 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RITA1Q96K30 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RITA1Q96K30 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RITA1Q96K30 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RITA1Q96K30 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.1■□□□□ 0.33
RITA1Q96K30 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RITA1Q96K30 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RITA1Q96K30 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RITA1Q96K30 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RITA1Q96K30 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RITA1Q96K30 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RITA1Q96K30 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RITA1Q96K30 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.1■□□□□ 0.33
RITA1Q96K30 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms