Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SPDL1Q96EA4 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDL1Q96EA4 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDL1Q96EA4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPDL1Q96EA4 KRT8P33-201ENST00000508125 1423 ntBASIC20.9■□□□□ 0.94
SPDL1Q96EA4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDL1Q96EA4 YBX1P4-201ENST00000392794 808 ntBASIC20.9■□□□□ 0.94
SPDL1Q96EA4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDL1Q96EA4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SPDL1Q96EA4 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SPDL1Q96EA4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.9■□□□□ 0.94
SPDL1Q96EA4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDL1Q96EA4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDL1Q96EA4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDL1Q96EA4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SPDL1Q96EA4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SPDL1Q96EA4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.94
SPDL1Q96EA4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
SPDL1Q96EA4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.89■□□□□ 0.94
SPDL1Q96EA4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.89■□□□□ 0.94
SPDL1Q96EA4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SPDL1Q96EA4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.89■□□□□ 0.94
SPDL1Q96EA4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPDL1Q96EA4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPDL1Q96EA4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPDL1Q96EA4 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
SPDL1Q96EA4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.89■□□□□ 0.93
SPDL1Q96EA4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.89■□□□□ 0.93
SPDL1Q96EA4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.89■□□□□ 0.93
SPDL1Q96EA4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.89■□□□□ 0.93
SPDL1Q96EA4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPDL1Q96EA4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPDL1Q96EA4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 AC087289.5-201ENST00000586076 3175 ntBASIC20.88■□□□□ 0.93
SPDL1Q96EA4 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPDL1Q96EA4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDL1Q96EA4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.87■□□□□ 0.93
SPDL1Q96EA4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
SPDL1Q96EA4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPDL1Q96EA4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.87■□□□□ 0.93
SPDL1Q96EA4 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.87■□□□□ 0.93
SPDL1Q96EA4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.87■□□□□ 0.93
SPDL1Q96EA4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.87■□□□□ 0.93
SPDL1Q96EA4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDL1Q96EA4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SPDL1Q96EA4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPDL1Q96EA4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPDL1Q96EA4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.86■□□□□ 0.93
SPDL1Q96EA4 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 AC012354.3-201ENST00000623734 483 ntBASIC20.86■□□□□ 0.93
SPDL1Q96EA4 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPDL1Q96EA4 AC004687.1-201ENST00000579003 1625 ntBASIC20.86■□□□□ 0.93
SPDL1Q96EA4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.85■□□□□ 0.93
SPDL1Q96EA4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDL1Q96EA4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDL1Q96EA4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDL1Q96EA4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDL1Q96EA4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDL1Q96EA4 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDL1Q96EA4 CA15P2-201ENST00000611168 834 ntBASIC20.85■□□□□ 0.93
SPDL1Q96EA4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDL1Q96EA4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPDL1Q96EA4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPDL1Q96EA4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPDL1Q96EA4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPDL1Q96EA4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms