Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
SMIM4Q8WVI0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMIM4Q8WVI0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMIM4Q8WVI0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SMIM4Q8WVI0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMIM4Q8WVI0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMIM4Q8WVI0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMIM4Q8WVI0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.24■□□□□ 0.51
SMIM4Q8WVI0 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.24■□□□□ 0.51
SMIM4Q8WVI0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
SMIM4Q8WVI0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SMIM4Q8WVI0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.24■□□□□ 0.51
SMIM4Q8WVI0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SMIM4Q8WVI0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.23■□□□□ 0.51
SMIM4Q8WVI0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SMIM4Q8WVI0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM4Q8WVI0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SMIM4Q8WVI0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM4Q8WVI0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM4Q8WVI0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM4Q8WVI0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
SMIM4Q8WVI0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM4Q8WVI0 AL391422.3-201ENST00000603791 2761 ntBASIC18.23■□□□□ 0.51
SMIM4Q8WVI0 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.23■□□□□ 0.51
SMIM4Q8WVI0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM4Q8WVI0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.23■□□□□ 0.51
SMIM4Q8WVI0 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SMIM4Q8WVI0 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
SMIM4Q8WVI0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM4Q8WVI0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SMIM4Q8WVI0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.21■□□□□ 0.51
SMIM4Q8WVI0 AC073314.1-201ENST00000568729 2216 ntBASIC18.21■□□□□ 0.51
SMIM4Q8WVI0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.21■□□□□ 0.51
SMIM4Q8WVI0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
SMIM4Q8WVI0 AC139795.1-202ENST00000500444 432 ntBASIC18.21■□□□□ 0.51
SMIM4Q8WVI0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM4Q8WVI0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SMIM4Q8WVI0 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM4Q8WVI0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
SMIM4Q8WVI0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SMIM4Q8WVI0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 AC005703.6-201ENST00000623265 1329 ntBASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.2■□□□□ 0.5
SMIM4Q8WVI0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM4Q8WVI0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM4Q8WVI0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM4Q8WVI0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM4Q8WVI0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
SMIM4Q8WVI0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM4Q8WVI0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.19■□□□□ 0.5
SMIM4Q8WVI0 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SMIM4Q8WVI0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.19■□□□□ 0.5
SMIM4Q8WVI0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
SMIM4Q8WVI0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.19■□□□□ 0.5
SMIM4Q8WVI0 AFG3L1P-217ENST00000557444 2447 ntBASIC18.19■□□□□ 0.5
SMIM4Q8WVI0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM4Q8WVI0 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SMIM4Q8WVI0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.18■□□□□ 0.5
SMIM4Q8WVI0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms