Protein–RNA interactions for Protein: Q8TCX1

DYNC2LI1, Cytoplasmic dynein 2 light intermediate chain 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DYNC2LI1Q8TCX1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
DYNC2LI1Q8TCX1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 AC018445.3-201ENST00000624177 1945 ntBASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 FP325331.1-202ENST00000623531 1380 ntBASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
DYNC2LI1Q8TCX1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
DYNC2LI1Q8TCX1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
DYNC2LI1Q8TCX1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
DYNC2LI1Q8TCX1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DYNC2LI1Q8TCX1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DYNC2LI1Q8TCX1 BX323043.1-201ENST00000641006 1765 ntBASIC18.89■□□□□ 0.61
DYNC2LI1Q8TCX1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.89■□□□□ 0.61
DYNC2LI1Q8TCX1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.89■□□□□ 0.61
DYNC2LI1Q8TCX1 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.89■□□□□ 0.61
DYNC2LI1Q8TCX1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.89■□□□□ 0.61
DYNC2LI1Q8TCX1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.89■□□□□ 0.61
DYNC2LI1Q8TCX1 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DYNC2LI1Q8TCX1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
DYNC2LI1Q8TCX1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DYNC2LI1Q8TCX1 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DYNC2LI1Q8TCX1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DYNC2LI1Q8TCX1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.89■□□□□ 0.61
DYNC2LI1Q8TCX1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.89■□□□□ 0.61
DYNC2LI1Q8TCX1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 AC009831.1-201ENST00000580420 1582 ntBASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DYNC2LI1Q8TCX1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DYNC2LI1Q8TCX1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 AC022413.1-201ENST00000624602 984 ntBASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
DYNC2LI1Q8TCX1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DYNC2LI1Q8TCX1 AC006128.1-201ENST00000624704 1661 ntBASIC18.85■□□□□ 0.61
DYNC2LI1Q8TCX1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
DYNC2LI1Q8TCX1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
DYNC2LI1Q8TCX1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms