Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.69■□□□□ 0.26
LINC01006Q8NI28 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.69■□□□□ 0.26
LINC01006Q8NI28 MIPEPP3-201ENST00000412105 444 ntBASIC16.69■□□□□ 0.26
LINC01006Q8NI28 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01006Q8NI28 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01006Q8NI28 AC008175.2-201ENST00000612840 297 ntBASIC16.69■□□□□ 0.26
LINC01006Q8NI28 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.69■□□□□ 0.26
LINC01006Q8NI28 AC008694.1-202ENST00000636953 945 ntBASIC16.69■□□□□ 0.26
LINC01006Q8NI28 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
LINC01006Q8NI28 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01006Q8NI28 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01006Q8NI28 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01006Q8NI28 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LINC01006Q8NI28 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 AC137767.1-201ENST00000602918 1920 ntBASIC16.68■□□□□ 0.26
LINC01006Q8NI28 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.68■□□□□ 0.26
LINC01006Q8NI28 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.67■□□□□ 0.26
LINC01006Q8NI28 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 AC069236.1-201ENST00000604339 616 ntBASIC16.67■□□□□ 0.26
LINC01006Q8NI28 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.67■□□□□ 0.26
LINC01006Q8NI28 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01006Q8NI28 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01006Q8NI28 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01006Q8NI28 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01006Q8NI28 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
LINC01006Q8NI28 AL512625.2-201ENST00000417533 625 ntBASIC16.66■□□□□ 0.26
LINC01006Q8NI28 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01006Q8NI28 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC01006Q8NI28 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.66■□□□□ 0.26
LINC01006Q8NI28 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.66■□□□□ 0.26
LINC01006Q8NI28 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.66■□□□□ 0.26
LINC01006Q8NI28 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.66■□□□□ 0.26
LINC01006Q8NI28 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.66■□□□□ 0.26
LINC01006Q8NI28 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.66■□□□□ 0.26
LINC01006Q8NI28 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01006Q8NI28 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
LINC01006Q8NI28 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 POU5F1P4-201ENST00000413175 1085 ntBASIC16.65■□□□□ 0.26
LINC01006Q8NI28 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 AC093787.1-201ENST00000450396 207 ntBASIC16.65■□□□□ 0.26
LINC01006Q8NI28 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 RNA5SP413-201ENST00000516373 109 ntBASIC16.65■□□□□ 0.26
LINC01006Q8NI28 AC016405.3-201ENST00000607710 860 ntBASIC16.65■□□□□ 0.26
LINC01006Q8NI28 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 AC087742.1-201ENST00000575880 1738 ntBASIC16.65■□□□□ 0.26
LINC01006Q8NI28 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
LINC01006Q8NI28 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms