Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SVIPQ8NHG7 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SVIPQ8NHG7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SVIPQ8NHG7 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SVIPQ8NHG7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC13.52□□□□□ -0.24
SVIPQ8NHG7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC13.52□□□□□ -0.24
SVIPQ8NHG7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
SVIPQ8NHG7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SVIPQ8NHG7 FLJ38576-201ENST00000623820 2459 ntBASIC13.52□□□□□ -0.24
SVIPQ8NHG7 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SVIPQ8NHG7 CICP14-201ENST00000629111 2732 ntBASIC13.52□□□□□ -0.24
SVIPQ8NHG7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.52□□□□□ -0.24
SVIPQ8NHG7 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SVIPQ8NHG7 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SVIPQ8NHG7 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SVIPQ8NHG7 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SVIPQ8NHG7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SVIPQ8NHG7 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.52□□□□□ -0.25
SVIPQ8NHG7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SVIPQ8NHG7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SVIPQ8NHG7 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SVIPQ8NHG7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.52□□□□□ -0.25
SVIPQ8NHG7 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SVIPQ8NHG7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SVIPQ8NHG7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.52□□□□□ -0.25
SVIPQ8NHG7 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SVIPQ8NHG7 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SVIPQ8NHG7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.52□□□□□ -0.25
SVIPQ8NHG7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 NFIC-211ENST00000641145 8399 ntBASIC13.51□□□□□ -0.25
SVIPQ8NHG7 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 AC012317.2-201ENST00000623305 2251 ntBASIC13.51□□□□□ -0.25
SVIPQ8NHG7 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SVIPQ8NHG7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
SVIPQ8NHG7 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 AP000845.1-201ENST00000581677 2131 ntBASIC13.49□□□□□ -0.25
SVIPQ8NHG7 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SVIPQ8NHG7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms