Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 PPP1R14BP3-201ENST00000509033 445 ntBASIC6.53□□□□□ -1.36
SYNE1Q8NF91 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 DUSP8P3-201ENST00000399571 1760 ntBASIC6.53□□□□□ -1.36
SYNE1Q8NF91 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 MIR4651-201ENST00000582622 73 ntBASIC6.53□□□□□ -1.36
SYNE1Q8NF91 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 BET1L-207ENST00000529614 560 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 AL139125.2-201ENST00000623134 1869 ntBASIC6.53□□□□□ -1.36
SYNE1Q8NF91 FP325331.1-202ENST00000623531 1380 ntBASIC6.53□□□□□ -1.36
SYNE1Q8NF91 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 USP45-205ENST00000472914 1617 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 AC010141.3-201ENST00000456659 717 ntBASIC6.53□□□□□ -1.36
SYNE1Q8NF91 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 MMAB-206ENST00000540016 945 ntTSL 3 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 TESC-206ENST00000541210 936 ntTSL 3 BASIC6.53□□□□□ -1.36
SYNE1Q8NF91 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.36
SYNE1Q8NF91 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
SYNE1Q8NF91 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 APTR-203ENST00000430801 583 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 METTL26-203ENST00000397664 604 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 PXK-203ENST00000383715 1756 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 PFKL-212ENST00000628044 129 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 SLC7A5P2-201ENST00000553010 536 ntBASIC6.52□□□□□ -1.37
SYNE1Q8NF91 PARP1-210ENST00000629232 477 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 LTK-203ENST00000453182 2412 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 FZD10-202ENST00000539839 3282 ntBASIC6.52□□□□□ -1.37
SYNE1Q8NF91 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC6.52□□□□□ -1.37
SYNE1Q8NF91 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms