Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.04■■□□□ 1.28
NPAS4Q8IUM7 AC008175.2-201ENST00000612840 297 ntBASIC23.04■■□□□ 1.28
NPAS4Q8IUM7 AC008694.1-202ENST00000636953 945 ntBASIC23.04■■□□□ 1.28
NPAS4Q8IUM7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.03■■□□□ 1.28
NPAS4Q8IUM7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NPAS4Q8IUM7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NPAS4Q8IUM7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
NPAS4Q8IUM7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
NPAS4Q8IUM7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.03■■□□□ 1.28
NPAS4Q8IUM7 AC069236.1-201ENST00000604339 616 ntBASIC23.03■■□□□ 1.28
NPAS4Q8IUM7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.03■■□□□ 1.28
NPAS4Q8IUM7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.03■■□□□ 1.28
NPAS4Q8IUM7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NPAS4Q8IUM7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
NPAS4Q8IUM7 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
NPAS4Q8IUM7 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
NPAS4Q8IUM7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPAS4Q8IUM7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPAS4Q8IUM7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
NPAS4Q8IUM7 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.02■■□□□ 1.28
NPAS4Q8IUM7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
NPAS4Q8IUM7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
NPAS4Q8IUM7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.02■■□□□ 1.28
NPAS4Q8IUM7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.02■■□□□ 1.28
NPAS4Q8IUM7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.02■■□□□ 1.28
NPAS4Q8IUM7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPAS4Q8IUM7 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
NPAS4Q8IUM7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
NPAS4Q8IUM7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 POU5F1P4-201ENST00000413175 1085 ntBASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 AL512625.2-201ENST00000417533 625 ntBASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
NPAS4Q8IUM7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23■■□□□ 1.27
NPAS4Q8IUM7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPAS4Q8IUM7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
NPAS4Q8IUM7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23■■□□□ 1.27
NPAS4Q8IUM7 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
NPAS4Q8IUM7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23■■□□□ 1.27
NPAS4Q8IUM7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23■■□□□ 1.27
NPAS4Q8IUM7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23■■□□□ 1.27
NPAS4Q8IUM7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC23■■□□□ 1.27
NPAS4Q8IUM7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPAS4Q8IUM7 AC016405.3-201ENST00000607710 860 ntBASIC23■■□□□ 1.27
NPAS4Q8IUM7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
NPAS4Q8IUM7 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
NPAS4Q8IUM7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
NPAS4Q8IUM7 AC137767.1-201ENST00000602918 1920 ntBASIC23■■□□□ 1.27
NPAS4Q8IUM7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPAS4Q8IUM7 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.99■■□□□ 1.27
NPAS4Q8IUM7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NPAS4Q8IUM7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC22.99■■□□□ 1.27
NPAS4Q8IUM7 AC093787.1-201ENST00000450396 207 ntBASIC22.99■■□□□ 1.27
NPAS4Q8IUM7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
NPAS4Q8IUM7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.99■■□□□ 1.27
NPAS4Q8IUM7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC22.99■■□□□ 1.27
NPAS4Q8IUM7 AC092118.2-201ENST00000613495 667 ntBASIC22.99■■□□□ 1.27
NPAS4Q8IUM7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
NPAS4Q8IUM7 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
NPAS4Q8IUM7 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 POU5F1P3-201ENST00000428824 1078 ntBASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 RNA5SP413-201ENST00000516373 109 ntBASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
NPAS4Q8IUM7 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPAS4Q8IUM7 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
NPAS4Q8IUM7 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
NPAS4Q8IUM7 AC087742.1-201ENST00000575880 1738 ntBASIC22.97■■□□□ 1.27
NPAS4Q8IUM7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
NPAS4Q8IUM7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
NPAS4Q8IUM7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.97■■□□□ 1.27
NPAS4Q8IUM7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22.97■■□□□ 1.27
NPAS4Q8IUM7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.97■■□□□ 1.27
NPAS4Q8IUM7 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.97■■□□□ 1.27
NPAS4Q8IUM7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms