Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF135Q8IUD6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.61■■□□□ 1.21
RNF135Q8IUD6 MYCNOS-205ENST00000641950 531 ntBASIC22.61■■□□□ 1.21
RNF135Q8IUD6 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RNF135Q8IUD6 KRT87P-202ENST00000534226 1464 ntBASIC22.6■■□□□ 1.21
RNF135Q8IUD6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RNF135Q8IUD6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF135Q8IUD6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF135Q8IUD6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RNF135Q8IUD6 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC22.6■■□□□ 1.21
RNF135Q8IUD6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RNF135Q8IUD6 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RNF135Q8IUD6 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.6■■□□□ 1.21
RNF135Q8IUD6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.6■■□□□ 1.21
RNF135Q8IUD6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF135Q8IUD6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.6■■□□□ 1.21
RNF135Q8IUD6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RNF135Q8IUD6 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.6■■□□□ 1.21
RNF135Q8IUD6 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC22.6■■□□□ 1.21
RNF135Q8IUD6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
RNF135Q8IUD6 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.59■■□□□ 1.21
RNF135Q8IUD6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
RNF135Q8IUD6 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
RNF135Q8IUD6 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF135Q8IUD6 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF135Q8IUD6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF135Q8IUD6 AL596275.1-201ENST00000423464 877 ntBASIC22.59■■□□□ 1.21
RNF135Q8IUD6 CNN2P6-201ENST00000439038 900 ntBASIC22.59■■□□□ 1.21
RNF135Q8IUD6 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC22.59■■□□□ 1.21
RNF135Q8IUD6 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.59■■□□□ 1.21
RNF135Q8IUD6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF135Q8IUD6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF135Q8IUD6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RNF135Q8IUD6 AC092068.2-201ENST00000590491 1708 ntBASIC22.59■■□□□ 1.21
RNF135Q8IUD6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.59■■□□□ 1.21
RNF135Q8IUD6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
RNF135Q8IUD6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF135Q8IUD6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
RNF135Q8IUD6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
RNF135Q8IUD6 AC010141.3-201ENST00000456659 717 ntBASIC22.58■■□□□ 1.21
RNF135Q8IUD6 SLC7A5P1-201ENST00000568957 537 ntBASIC22.58■■□□□ 1.21
RNF135Q8IUD6 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF135Q8IUD6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RNF135Q8IUD6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
RNF135Q8IUD6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
RNF135Q8IUD6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF135Q8IUD6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF135Q8IUD6 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RNF135Q8IUD6 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF135Q8IUD6 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
RNF135Q8IUD6 GCSHP5-201ENST00000443090 522 ntBASIC22.57■■□□□ 1.2
RNF135Q8IUD6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF135Q8IUD6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RNF135Q8IUD6 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RNF135Q8IUD6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.57■■□□□ 1.2
RNF135Q8IUD6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
RNF135Q8IUD6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.57■■□□□ 1.2
RNF135Q8IUD6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
RNF135Q8IUD6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF135Q8IUD6 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
RNF135Q8IUD6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF135Q8IUD6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF135Q8IUD6 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
RNF135Q8IUD6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
RNF135Q8IUD6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC22.56■■□□□ 1.2
RNF135Q8IUD6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.56■■□□□ 1.2
RNF135Q8IUD6 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RNF135Q8IUD6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RNF135Q8IUD6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms