Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.72■□□□□ 0.75
VRK2Q86Y07 AL034346.1-201ENST00000568244 1277 ntBASIC19.72■□□□□ 0.75
VRK2Q86Y07 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK2Q86Y07 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VRK2Q86Y07 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VRK2Q86Y07 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.72■□□□□ 0.75
VRK2Q86Y07 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK2Q86Y07 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.71■□□□□ 0.75
VRK2Q86Y07 AF106564.1-201ENST00000607058 2553 ntBASIC19.71■□□□□ 0.75
VRK2Q86Y07 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK2Q86Y07 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
VRK2Q86Y07 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK2Q86Y07 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
VRK2Q86Y07 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK2Q86Y07 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK2Q86Y07 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VRK2Q86Y07 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.71■□□□□ 0.75
VRK2Q86Y07 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.71■□□□□ 0.75
VRK2Q86Y07 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.71■□□□□ 0.75
VRK2Q86Y07 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VRK2Q86Y07 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.71■□□□□ 0.75
VRK2Q86Y07 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.71■□□□□ 0.75
VRK2Q86Y07 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VRK2Q86Y07 AC126544.1-201ENST00000580842 1059 ntBASIC19.71■□□□□ 0.75
VRK2Q86Y07 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.71■□□□□ 0.75
VRK2Q86Y07 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VRK2Q86Y07 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.71■□□□□ 0.75
VRK2Q86Y07 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK2Q86Y07 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK2Q86Y07 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.71■□□□□ 0.75
VRK2Q86Y07 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
VRK2Q86Y07 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.71■□□□□ 0.75
VRK2Q86Y07 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.71■□□□□ 0.75
VRK2Q86Y07 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
VRK2Q86Y07 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.7■□□□□ 0.74
VRK2Q86Y07 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VRK2Q86Y07 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VRK2Q86Y07 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.7■□□□□ 0.74
VRK2Q86Y07 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VRK2Q86Y07 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
VRK2Q86Y07 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
VRK2Q86Y07 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.7■□□□□ 0.74
VRK2Q86Y07 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
VRK2Q86Y07 AC133561.4-201ENST00000566112 224 ntBASIC19.7■□□□□ 0.74
VRK2Q86Y07 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VRK2Q86Y07 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
VRK2Q86Y07 AC003102.1-202ENST00000563394 1796 ntBASIC19.7■□□□□ 0.74
VRK2Q86Y07 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VRK2Q86Y07 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
VRK2Q86Y07 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VRK2Q86Y07 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VRK2Q86Y07 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VRK2Q86Y07 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
VRK2Q86Y07 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.69■□□□□ 0.74
VRK2Q86Y07 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VRK2Q86Y07 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.69■□□□□ 0.74
VRK2Q86Y07 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.69■□□□□ 0.74
VRK2Q86Y07 PBX2P1-201ENST00000493219 1291 ntBASIC19.69■□□□□ 0.74
VRK2Q86Y07 SMUG1P1-201ENST00000590640 811 ntBASIC19.69■□□□□ 0.74
VRK2Q86Y07 AC008764.7-201ENST00000593779 1081 ntBASIC19.69■□□□□ 0.74
VRK2Q86Y07 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.69■□□□□ 0.74
VRK2Q86Y07 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VRK2Q86Y07 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VRK2Q86Y07 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VRK2Q86Y07 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
VRK2Q86Y07 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.69■□□□□ 0.74
VRK2Q86Y07 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
VRK2Q86Y07 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
VRK2Q86Y07 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.69■□□□□ 0.74
VRK2Q86Y07 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VRK2Q86Y07 FEM1AP4-201ENST00000443167 1987 ntBASIC19.68■□□□□ 0.74
VRK2Q86Y07 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.68■□□□□ 0.74
VRK2Q86Y07 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VRK2Q86Y07 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VRK2Q86Y07 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.68■□□□□ 0.74
VRK2Q86Y07 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VRK2Q86Y07 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VRK2Q86Y07 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
VRK2Q86Y07 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VRK2Q86Y07 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VRK2Q86Y07 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VRK2Q86Y07 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VRK2Q86Y07 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.68■□□□□ 0.74
VRK2Q86Y07 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
VRK2Q86Y07 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
VRK2Q86Y07 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.67■□□□□ 0.74
VRK2Q86Y07 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.67■□□□□ 0.74
VRK2Q86Y07 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
VRK2Q86Y07 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VRK2Q86Y07 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VRK2Q86Y07 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VRK2Q86Y07 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VRK2Q86Y07 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VRK2Q86Y07 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.67■□□□□ 0.74
VRK2Q86Y07 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.67■□□□□ 0.74
VRK2Q86Y07 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
VRK2Q86Y07 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
VRK2Q86Y07 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
VRK2Q86Y07 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.67■□□□□ 0.74
VRK2Q86Y07 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms