Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
LINC00575Q6W349 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00575Q6W349 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00575Q6W349 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00575Q6W349 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00575Q6W349 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00575Q6W349 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 AC120024.1-201ENST00000562672 995 ntBASIC13.5□□□□□ -0.25
LINC00575Q6W349 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00575Q6W349 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00575Q6W349 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC13.5□□□□□ -0.25
LINC00575Q6W349 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
LINC00575Q6W349 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 GABARAPL3-202ENST00000624044 1851 ntBASIC13.5□□□□□ -0.25
LINC00575Q6W349 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
LINC00575Q6W349 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC13.5□□□□□ -0.25
LINC00575Q6W349 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
LINC00575Q6W349 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
LINC00575Q6W349 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00575Q6W349 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
LINC00575Q6W349 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00575Q6W349 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00575Q6W349 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00575Q6W349 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00575Q6W349 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00575Q6W349 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00575Q6W349 AC019171.1-201ENST00000601251 1056 ntBASIC13.49□□□□□ -0.25
LINC00575Q6W349 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC13.49□□□□□ -0.25
LINC00575Q6W349 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00575Q6W349 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00575Q6W349 AC004687.1-201ENST00000579003 1625 ntBASIC13.49□□□□□ -0.25
LINC00575Q6W349 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00575Q6W349 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00575Q6W349 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
LINC00575Q6W349 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
LINC00575Q6W349 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC13.49□□□□□ -0.25
LINC00575Q6W349 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.49□□□□□ -0.25
LINC00575Q6W349 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00575Q6W349 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00575Q6W349 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00575Q6W349 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
LINC00575Q6W349 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC00575Q6W349 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
LINC00575Q6W349 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC00575Q6W349 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC13.48□□□□□ -0.25
LINC00575Q6W349 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 C17orf82-201ENST00000623772 1530 ntBASIC13.48□□□□□ -0.25
LINC00575Q6W349 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
LINC00575Q6W349 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC13.48□□□□□ -0.25
LINC00575Q6W349 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
LINC00575Q6W349 AL049796.1-201ENST00000565336 1766 ntBASIC13.48□□□□□ -0.25
LINC00575Q6W349 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
LINC00575Q6W349 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00575Q6W349 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00575Q6W349 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00575Q6W349 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00575Q6W349 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
LINC00575Q6W349 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00575Q6W349 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00575Q6W349 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00575Q6W349 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00575Q6W349 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00575Q6W349 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
LINC00575Q6W349 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
LINC00575Q6W349 ASB1-202ENST00000409297 878 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00575Q6W349 DYM-203ENST00000442713 2147 ntTSL 2 BASIC13.47□□□□□ -0.25
LINC00575Q6W349 HYI-210ENST00000486909 905 ntTSL 5 BASIC13.47□□□□□ -0.25
LINC00575Q6W349 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms