Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf88Q6PI97 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
C11orf88Q6PI97 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.46■□□□□ 0.55
C11orf88Q6PI97 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
C11orf88Q6PI97 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
C11orf88Q6PI97 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
C11orf88Q6PI97 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
C11orf88Q6PI97 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
C11orf88Q6PI97 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.46■□□□□ 0.55
C11orf88Q6PI97 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.46■□□□□ 0.55
C11orf88Q6PI97 AC010542.4-201ENST00000563151 1910 ntBASIC18.46■□□□□ 0.55
C11orf88Q6PI97 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
C11orf88Q6PI97 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
C11orf88Q6PI97 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 MIR3621-201ENST00000580529 85 ntBASIC18.45■□□□□ 0.54
C11orf88Q6PI97 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
C11orf88Q6PI97 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
C11orf88Q6PI97 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
C11orf88Q6PI97 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
C11orf88Q6PI97 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
C11orf88Q6PI97 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
C11orf88Q6PI97 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.44■□□□□ 0.54
C11orf88Q6PI97 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
C11orf88Q6PI97 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C11orf88Q6PI97 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.44■□□□□ 0.54
C11orf88Q6PI97 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
C11orf88Q6PI97 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C11orf88Q6PI97 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
C11orf88Q6PI97 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
C11orf88Q6PI97 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
C11orf88Q6PI97 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
C11orf88Q6PI97 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf88Q6PI97 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
C11orf88Q6PI97 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf88Q6PI97 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf88Q6PI97 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf88Q6PI97 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf88Q6PI97 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf88Q6PI97 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
C11orf88Q6PI97 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.43■□□□□ 0.54
C11orf88Q6PI97 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf88Q6PI97 AL117332.1-201ENST00000622628 974 ntBASIC18.43■□□□□ 0.54
C11orf88Q6PI97 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
C11orf88Q6PI97 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.43■□□□□ 0.54
C11orf88Q6PI97 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 AC131274.2-201ENST00000580697 1507 ntBASIC18.42■□□□□ 0.54
C11orf88Q6PI97 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
C11orf88Q6PI97 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.41■□□□□ 0.54
C11orf88Q6PI97 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
C11orf88Q6PI97 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
C11orf88Q6PI97 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
C11orf88Q6PI97 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.41■□□□□ 0.54
C11orf88Q6PI97 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.41■□□□□ 0.54
C11orf88Q6PI97 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
C11orf88Q6PI97 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
C11orf88Q6PI97 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
C11orf88Q6PI97 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
C11orf88Q6PI97 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.4■□□□□ 0.54
C11orf88Q6PI97 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms