Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.69■□□□□ 0.9
SGO1Q5FBB7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SGO1Q5FBB7 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.69■□□□□ 0.9
SGO1Q5FBB7 AL136162.1-201ENST00000607711 1078 ntBASIC20.69■□□□□ 0.9
SGO1Q5FBB7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.69■□□□□ 0.9
SGO1Q5FBB7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.69■□□□□ 0.9
SGO1Q5FBB7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SGO1Q5FBB7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SGO1Q5FBB7 AC008406.3-201ENST00000620001 1374 ntBASIC20.69■□□□□ 0.9
SGO1Q5FBB7 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SGO1Q5FBB7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SGO1Q5FBB7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SGO1Q5FBB7 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SGO1Q5FBB7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.68■□□□□ 0.9
SGO1Q5FBB7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SGO1Q5FBB7 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
SGO1Q5FBB7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SGO1Q5FBB7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SGO1Q5FBB7 AP005435.1-201ENST00000529293 1178 ntBASIC20.68■□□□□ 0.9
SGO1Q5FBB7 AC024257.2-201ENST00000549699 147 ntBASIC20.68■□□□□ 0.9
SGO1Q5FBB7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.68■□□□□ 0.9
SGO1Q5FBB7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SGO1Q5FBB7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SGO1Q5FBB7 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SGO1Q5FBB7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SGO1Q5FBB7 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.68■□□□□ 0.9
SGO1Q5FBB7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.67■□□□□ 0.9
SGO1Q5FBB7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SGO1Q5FBB7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SGO1Q5FBB7 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SGO1Q5FBB7 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SGO1Q5FBB7 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.66■□□□□ 0.9
SGO1Q5FBB7 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.66■□□□□ 0.9
SGO1Q5FBB7 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SGO1Q5FBB7 AC005229.4-201ENST00000610085 2198 ntBASIC20.66■□□□□ 0.9
SGO1Q5FBB7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.66■□□□□ 0.9
SGO1Q5FBB7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SGO1Q5FBB7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
SGO1Q5FBB7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SGO1Q5FBB7 AP004607.7-201ENST00000527152 1677 ntBASIC20.65■□□□□ 0.9
SGO1Q5FBB7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SGO1Q5FBB7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SGO1Q5FBB7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.65■□□□□ 0.9
SGO1Q5FBB7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SGO1Q5FBB7 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SGO1Q5FBB7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SGO1Q5FBB7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SGO1Q5FBB7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SGO1Q5FBB7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.65■□□□□ 0.9
SGO1Q5FBB7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SGO1Q5FBB7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SGO1Q5FBB7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SGO1Q5FBB7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SGO1Q5FBB7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SGO1Q5FBB7 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SGO1Q5FBB7 Z98882.1-201ENST00000622160 2253 ntBASIC20.64■□□□□ 0.89
SGO1Q5FBB7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SGO1Q5FBB7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SGO1Q5FBB7 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SGO1Q5FBB7 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.64■□□□□ 0.89
SGO1Q5FBB7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SGO1Q5FBB7 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SGO1Q5FBB7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SGO1Q5FBB7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SGO1Q5FBB7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
SGO1Q5FBB7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.63■□□□□ 0.89
SGO1Q5FBB7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.63■□□□□ 0.89
SGO1Q5FBB7 AC135279.3-201ENST00000610945 1311 ntBASIC20.63■□□□□ 0.89
SGO1Q5FBB7 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SGO1Q5FBB7 AC096631.2-201ENST00000436136 790 ntBASIC20.63■□□□□ 0.89
SGO1Q5FBB7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.63■□□□□ 0.89
SGO1Q5FBB7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.63■□□□□ 0.89
SGO1Q5FBB7 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.63■□□□□ 0.89
SGO1Q5FBB7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SGO1Q5FBB7 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SGO1Q5FBB7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SGO1Q5FBB7 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SGO1Q5FBB7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SGO1Q5FBB7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SGO1Q5FBB7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.62■□□□□ 0.89
SGO1Q5FBB7 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms