Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
ATP2B3Q16720 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC26.22■■□□□ 1.79
ATP2B3Q16720 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ATP2B3Q16720 AC080038.1-201ENST00000611274 1154 ntBASIC26.22■■□□□ 1.79
ATP2B3Q16720 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ATP2B3Q16720 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
ATP2B3Q16720 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ATP2B3Q16720 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
ATP2B3Q16720 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
ATP2B3Q16720 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC26.22■■□□□ 1.79
ATP2B3Q16720 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC26.21■■□□□ 1.79
ATP2B3Q16720 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
ATP2B3Q16720 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ATP2B3Q16720 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ATP2B3Q16720 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.21■■□□□ 1.79
ATP2B3Q16720 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
ATP2B3Q16720 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.21■■□□□ 1.79
ATP2B3Q16720 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ATP2B3Q16720 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
ATP2B3Q16720 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ATP2B3Q16720 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
ATP2B3Q16720 SPI1-203ENST00000533030 661 ntTSL 2 BASIC26.21■■□□□ 1.79
ATP2B3Q16720 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC26.21■■□□□ 1.79
ATP2B3Q16720 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
ATP2B3Q16720 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
ATP2B3Q16720 GAS2L1P2-201ENST00000436355 1356 ntBASIC26.2■■□□□ 1.79
ATP2B3Q16720 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
ATP2B3Q16720 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
ATP2B3Q16720 GALC-202ENST00000393568 2054 ntTSL 2 BASIC26.2■■□□□ 1.78
ATP2B3Q16720 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ATP2B3Q16720 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
ATP2B3Q16720 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ATP2B3Q16720 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC26.2■■□□□ 1.78
ATP2B3Q16720 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ATP2B3Q16720 AP001160.3-201ENST00000601484 763 ntBASIC26.2■■□□□ 1.78
ATP2B3Q16720 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
ATP2B3Q16720 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ATP2B3Q16720 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ATP2B3Q16720 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ATP2B3Q16720 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC26.2■■□□□ 1.78
ATP2B3Q16720 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.19■■□□□ 1.78
ATP2B3Q16720 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
ATP2B3Q16720 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.19■■□□□ 1.78
ATP2B3Q16720 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
ATP2B3Q16720 BID-214ENST00000617586 542 ntTSL 5 BASIC26.19■■□□□ 1.78
ATP2B3Q16720 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
ATP2B3Q16720 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.19■■□□□ 1.78
ATP2B3Q16720 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ATP2B3Q16720 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ATP2B3Q16720 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC26.18■■□□□ 1.78
ATP2B3Q16720 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ATP2B3Q16720 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ATP2B3Q16720 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ATP2B3Q16720 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ATP2B3Q16720 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.18■■□□□ 1.78
ATP2B3Q16720 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.18■■□□□ 1.78
ATP2B3Q16720 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC26.18■■□□□ 1.78
ATP2B3Q16720 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC26.18■■□□□ 1.78
ATP2B3Q16720 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC26.18■■□□□ 1.78
ATP2B3Q16720 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ATP2B3Q16720 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ATP2B3Q16720 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ATP2B3Q16720 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ATP2B3Q16720 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.17■■□□□ 1.78
ATP2B3Q16720 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ATP2B3Q16720 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ATP2B3Q16720 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC26.17■■□□□ 1.78
ATP2B3Q16720 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
ATP2B3Q16720 KRT18P11-201ENST00000435214 1283 ntBASIC26.17■■□□□ 1.78
ATP2B3Q16720 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
ATP2B3Q16720 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC26.17■■□□□ 1.78
ATP2B3Q16720 EEF1DP3-203ENST00000566025 782 ntBASIC26.17■■□□□ 1.78
ATP2B3Q16720 AC138907.5-202ENST00000569484 235 ntBASIC26.17■■□□□ 1.78
ATP2B3Q16720 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
ATP2B3Q16720 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
ATP2B3Q16720 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.17■■□□□ 1.78
ATP2B3Q16720 AC092053.2-201ENST00000640557 1818 ntBASIC26.16■■□□□ 1.78
ATP2B3Q16720 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.16■■□□□ 1.78
ATP2B3Q16720 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ATP2B3Q16720 AC010141.2-201ENST00000452426 721 ntBASIC26.16■■□□□ 1.78
ATP2B3Q16720 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC26.16■■□□□ 1.78
ATP2B3Q16720 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
ATP2B3Q16720 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ATP2B3Q16720 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ATP2B3Q16720 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC26.16■■□□□ 1.78
ATP2B3Q16720 AC073111.5-205ENST00000641717 521 ntBASIC26.16■■□□□ 1.78
ATP2B3Q16720 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
ATP2B3Q16720 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
ATP2B3Q16720 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
ATP2B3Q16720 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
ATP2B3Q16720 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC26.15■■□□□ 1.78
ATP2B3Q16720 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ATP2B3Q16720 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ATP2B3Q16720 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ATP2B3Q16720 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ATP2B3Q16720 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ATP2B3Q16720 UBE2DNL-204ENST00000602536 740 ntBASIC26.15■■□□□ 1.78
ATP2B3Q16720 RAP2CP1-201ENST00000605103 478 ntBASIC26.15■■□□□ 1.78
ATP2B3Q16720 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.15■■□□□ 1.78
ATP2B3Q16720 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms