Protein–RNA interactions for Protein: P63272

SUPT4H1, Transcription elongation factor SPT4, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1P63272 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SUPT4H1P63272 OR7E47P-201ENST00000546390 1422 ntBASIC17.6■□□□□ 0.41
SUPT4H1P63272 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SUPT4H1P63272 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.6■□□□□ 0.41
SUPT4H1P63272 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SUPT4H1P63272 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SUPT4H1P63272 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.6■□□□□ 0.41
SUPT4H1P63272 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.6■□□□□ 0.41
SUPT4H1P63272 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SUPT4H1P63272 AP005212.1-201ENST00000581547 1997 ntBASIC17.6■□□□□ 0.41
SUPT4H1P63272 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.6■□□□□ 0.41
SUPT4H1P63272 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SUPT4H1P63272 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SUPT4H1P63272 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUPT4H1P63272 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.59■□□□□ 0.41
SUPT4H1P63272 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUPT4H1P63272 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.59■□□□□ 0.41
SUPT4H1P63272 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.59■□□□□ 0.41
SUPT4H1P63272 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SUPT4H1P63272 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUPT4H1P63272 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.59■□□□□ 0.41
SUPT4H1P63272 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SUPT4H1P63272 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.59■□□□□ 0.41
SUPT4H1P63272 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SUPT4H1P63272 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.59■□□□□ 0.41
SUPT4H1P63272 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SUPT4H1P63272 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SUPT4H1P63272 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.58■□□□□ 0.41
SUPT4H1P63272 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.58■□□□□ 0.41
SUPT4H1P63272 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SUPT4H1P63272 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SUPT4H1P63272 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.58■□□□□ 0.41
SUPT4H1P63272 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUPT4H1P63272 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUPT4H1P63272 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SUPT4H1P63272 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC17.58■□□□□ 0.4
SUPT4H1P63272 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SUPT4H1P63272 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUPT4H1P63272 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SUPT4H1P63272 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
SUPT4H1P63272 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUPT4H1P63272 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUPT4H1P63272 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.58■□□□□ 0.4
SUPT4H1P63272 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUPT4H1P63272 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SUPT4H1P63272 AC073314.1-201ENST00000568729 2216 ntBASIC17.57■□□□□ 0.4
SUPT4H1P63272 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SUPT4H1P63272 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC17.57■□□□□ 0.4
SUPT4H1P63272 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUPT4H1P63272 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUPT4H1P63272 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUPT4H1P63272 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUPT4H1P63272 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUPT4H1P63272 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.57■□□□□ 0.4
SUPT4H1P63272 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SUPT4H1P63272 AC103834.1-201ENST00000520383 144 ntBASIC17.57■□□□□ 0.4
SUPT4H1P63272 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SUPT4H1P63272 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SUPT4H1P63272 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.57■□□□□ 0.4
SUPT4H1P63272 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.57■□□□□ 0.4
SUPT4H1P63272 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SUPT4H1P63272 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUPT4H1P63272 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.57■□□□□ 0.4
SUPT4H1P63272 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SUPT4H1P63272 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.57■□□□□ 0.4
SUPT4H1P63272 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.56■□□□□ 0.4
SUPT4H1P63272 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
SUPT4H1P63272 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT4H1P63272 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.56■□□□□ 0.4
SUPT4H1P63272 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT4H1P63272 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT4H1P63272 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT4H1P63272 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT4H1P63272 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT4H1P63272 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT4H1P63272 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT4H1P63272 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT4H1P63272 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.56■□□□□ 0.4
SUPT4H1P63272 AC103724.3-201ENST00000564481 992 ntBASIC17.56■□□□□ 0.4
SUPT4H1P63272 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT4H1P63272 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT4H1P63272 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT4H1P63272 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SUPT4H1P63272 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SUPT4H1P63272 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SUPT4H1P63272 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
SUPT4H1P63272 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SUPT4H1P63272 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.55■□□□□ 0.4
SUPT4H1P63272 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT4H1P63272 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT4H1P63272 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT4H1P63272 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT4H1P63272 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC17.55■□□□□ 0.4
SUPT4H1P63272 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.55■□□□□ 0.4
SUPT4H1P63272 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.55■□□□□ 0.4
SUPT4H1P63272 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT4H1P63272 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT4H1P63272 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
SUPT4H1P63272 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SUPT4H1P63272 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms