Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RPS28P62857 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RPS28P62857 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RPS28P62857 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RPS28P62857 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
RPS28P62857 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RPS28P62857 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC12.52□□□□□ -0.41
RPS28P62857 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RPS28P62857 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
RPS28P62857 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RPS28P62857 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC12.51□□□□□ -0.41
RPS28P62857 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RPS28P62857 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RPS28P62857 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
RPS28P62857 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RPS28P62857 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RPS28P62857 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RPS28P62857 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RPS28P62857 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.51□□□□□ -0.41
RPS28P62857 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC12.51□□□□□ -0.41
RPS28P62857 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RPS28P62857 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RPS28P62857 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RPS28P62857 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RPS28P62857 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
RPS28P62857 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RPS28P62857 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RPS28P62857 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.51□□□□□ -0.41
RPS28P62857 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC12.51□□□□□ -0.41
RPS28P62857 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
RPS28P62857 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RPS28P62857 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.51□□□□□ -0.41
RPS28P62857 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
RPS28P62857 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
RPS28P62857 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RPS28P62857 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
RPS28P62857 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 GOLGA2P6-201ENST00000340929 2049 ntBASIC12.5□□□□□ -0.41
RPS28P62857 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC12.5□□□□□ -0.41
RPS28P62857 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
RPS28P62857 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
RPS28P62857 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC12.5□□□□□ -0.41
RPS28P62857 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
RPS28P62857 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 AC009053.2-201ENST00000563701 2365 ntBASIC12.5□□□□□ -0.41
RPS28P62857 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC12.5□□□□□ -0.41
RPS28P62857 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
RPS28P62857 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RPS28P62857 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RPS28P62857 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RPS28P62857 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RPS28P62857 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RPS28P62857 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RPS28P62857 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
RPS28P62857 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RPS28P62857 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RPS28P62857 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RPS28P62857 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC12.49□□□□□ -0.41
RPS28P62857 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RPS28P62857 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
RPS28P62857 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC12.49□□□□□ -0.41
RPS28P62857 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
RPS28P62857 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
RPS28P62857 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RPS28P62857 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RPS28P62857 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
RPS28P62857 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC12.49□□□□□ -0.41
RPS28P62857 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RPS28P62857 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RPS28P62857 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RPS28P62857 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RPS28P62857 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
RPS28P62857 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
RPS28P62857 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC12.49□□□□□ -0.41
RPS28P62857 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
RPS28P62857 C8orf49-201ENST00000525043 1968 ntBASIC12.49□□□□□ -0.41
RPS28P62857 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
RPS28P62857 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.48□□□□□ -0.41
RPS28P62857 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
RPS28P62857 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RPS28P62857 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPS28P62857 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC12.48□□□□□ -0.41
RPS28P62857 HLA-L-211ENST00000482052 1765 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms