Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
WNT3P56703 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
WNT3P56703 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
WNT3P56703 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
WNT3P56703 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.2■□□□□ 0.82
WNT3P56703 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
WNT3P56703 EDA-201ENST00000338901 1233 ntBASIC20.2■□□□□ 0.82
WNT3P56703 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.2■□□□□ 0.82
WNT3P56703 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.2■□□□□ 0.82
WNT3P56703 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
WNT3P56703 AL355001.2-201ENST00000620617 1191 ntBASIC20.2■□□□□ 0.82
WNT3P56703 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.2■□□□□ 0.82
WNT3P56703 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.2■□□□□ 0.82
WNT3P56703 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
WNT3P56703 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
WNT3P56703 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
WNT3P56703 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
WNT3P56703 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
WNT3P56703 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.19■□□□□ 0.82
WNT3P56703 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
WNT3P56703 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
WNT3P56703 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.19■□□□□ 0.82
WNT3P56703 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.19■□□□□ 0.82
WNT3P56703 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
WNT3P56703 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
WNT3P56703 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
WNT3P56703 AP004607.7-201ENST00000527152 1677 ntBASIC20.19■□□□□ 0.82
WNT3P56703 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
WNT3P56703 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
WNT3P56703 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.18■□□□□ 0.82
WNT3P56703 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
WNT3P56703 AC003102.1-202ENST00000563394 1796 ntBASIC20.18■□□□□ 0.82
WNT3P56703 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
WNT3P56703 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
WNT3P56703 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
WNT3P56703 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
WNT3P56703 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
WNT3P56703 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
WNT3P56703 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.18■□□□□ 0.82
WNT3P56703 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.18■□□□□ 0.82
WNT3P56703 AP001330.3-201ENST00000520123 633 ntBASIC20.18■□□□□ 0.82
WNT3P56703 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.18■□□□□ 0.82
WNT3P56703 AL034346.1-201ENST00000568244 1277 ntBASIC20.18■□□□□ 0.82
WNT3P56703 AL136967.2-201ENST00000623968 743 ntBASIC20.18■□□□□ 0.82
WNT3P56703 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.18■□□□□ 0.82
WNT3P56703 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.18■□□□□ 0.82
WNT3P56703 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
WNT3P56703 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
WNT3P56703 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
WNT3P56703 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
WNT3P56703 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
WNT3P56703 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
WNT3P56703 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
WNT3P56703 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
WNT3P56703 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
WNT3P56703 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
WNT3P56703 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.17■□□□□ 0.82
WNT3P56703 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
WNT3P56703 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
WNT3P56703 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.17■□□□□ 0.82
WNT3P56703 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.17■□□□□ 0.82
WNT3P56703 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.17■□□□□ 0.82
WNT3P56703 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
WNT3P56703 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
WNT3P56703 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
WNT3P56703 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
WNT3P56703 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3P56703 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3P56703 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3P56703 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3P56703 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3P56703 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3P56703 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3P56703 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
WNT3P56703 AC105265.2-201ENST00000467189 838 ntBASIC20.16■□□□□ 0.82
WNT3P56703 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
WNT3P56703 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.16■□□□□ 0.82
WNT3P56703 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3P56703 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3P56703 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3P56703 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
WNT3P56703 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3P56703 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.15■□□□□ 0.82
WNT3P56703 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.15■□□□□ 0.82
WNT3P56703 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3P56703 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3P56703 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3P56703 MIR939-201ENST00000401314 82 ntBASIC20.15■□□□□ 0.82
WNT3P56703 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3P56703 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
WNT3P56703 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3P56703 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
WNT3P56703 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
WNT3P56703 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
WNT3P56703 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
WNT3P56703 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
WNT3P56703 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
WNT3P56703 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
WNT3P56703 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.14■□□□□ 0.81
WNT3P56703 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms