Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 MET14YKL001C 609 nt4.05□□□□□ -1.76
SUB1P54000 RPL15AYLR029C 615 nt4.05□□□□□ -1.76
SUB1P54000 IDP2YLR174W 1239 nt4.05□□□□□ -1.76
SUB1P54000 YLR400WYLR400W 474 nt4.05□□□□□ -1.76
SUB1P54000 ECM16YMR128W 3804 nt4.05□□□□□ -1.76
SUB1P54000 YMR306C-AYMR306C-A 390 nt4.05□□□□□ -1.76
SUB1P54000 ASI2YNL159C 870 nt4.05□□□□□ -1.76
SUB1P54000 RPA43YOR340C 981 nt4.05□□□□□ -1.76
SUB1P54000 CCL1YPR025C 1182 nt4.05□□□□□ -1.76
SUB1P54000 SMC3YJL074C 3693 nt4.05□□□□□ -1.76
SUB1P54000 PTM1YKL039W 1572 nt4.05□□□□□ -1.76
SUB1P54000 TEC1YBR083W 1461 nt4.05□□□□□ -1.76
SUB1P54000 PFK26YIL107C 2484 nt4.04□□□□□ -1.76
SUB1P54000 SEC27YGL137W 2670 nt4.04□□□□□ -1.76
SUB1P54000 BEM4YPL161C 1902 nt4.04□□□□□ -1.76
SUB1P54000 SPR6YER115C 576 nt4.04□□□□□ -1.76
SUB1P54000 SPT15YER148W 723 nt4.04□□□□□ -1.76
SUB1P54000 VPS25YJR102C 609 nt4.04□□□□□ -1.76
SUB1P54000 YLR154W-BYLR154W-B 165 nt4.04□□□□□ -1.76
SUB1P54000 NNT1YLR285W 786 nt4.04□□□□□ -1.76
SUB1P54000 YOR203WYOR203W 354 nt4.04□□□□□ -1.76
SUB1P54000 YPL278CYPL278C 303 nt4.04□□□□□ -1.76
SUB1P54000 TOM70YNL121C 1854 nt4.04□□□□□ -1.76
SUB1P54000 RED1YLR263W 2484 nt4.04□□□□□ -1.76
SUB1P54000 FLO9YAL063C 3969 nt4.04□□□□□ -1.76
SUB1P54000 IRC3YDR332W 2070 nt4.04□□□□□ -1.76
SUB1P54000 MSK1YNL073W 1731 nt4.04□□□□□ -1.76
SUB1P54000 YCG1YDR325W 3108 nt4.04□□□□□ -1.76
SUB1P54000 PEX6YNL329C 3093 nt4.03□□□□□ -1.76
SUB1P54000 YDL050CYDL050C 372 nt4.03□□□□□ -1.76
SUB1P54000 PLP1YDR183W 693 nt4.03□□□□□ -1.76
SUB1P54000 YER034WYER034W 558 nt4.03□□□□□ -1.76
SUB1P54000 MEI4YER044C-A 1227 nt4.03□□□□□ -1.76
SUB1P54000 COBQ0105 1158 nt4.03□□□□□ -1.76
SUB1P54000 EFG1YGR271C-A 702 nt4.03□□□□□ -1.76
SUB1P54000 RPA12YJR063W 378 nt4.03□□□□□ -1.76
SUB1P54000 NRK1YNL129W 723 nt4.03□□□□□ -1.76
SUB1P54000 YOL114CYOL114C 609 nt4.03□□□□□ -1.76
SUB1P54000 PNG1YPL096W 1092 nt4.03□□□□□ -1.76
SUB1P54000 ZDS1YMR273C 2748 nt4.03□□□□□ -1.76
SUB1P54000 CIK1YMR198W 1785 nt4.02□□□□□ -1.77
SUB1P54000 YMR018WYMR018W 1545 nt4.02□□□□□ -1.77
SUB1P54000 SPC105YGL093W 2754 nt4.02□□□□□ -1.77
SUB1P54000 API2YDR525W 330 nt4.02□□□□□ -1.77
SUB1P54000 RGI1YER067W 486 nt4.02□□□□□ -1.77
SUB1P54000 SMX2YFL017W-A 234 nt4.02□□□□□ -1.77
SUB1P54000 LST7YGR057C 729 nt4.02□□□□□ -1.77
SUB1P54000 UPF3YGR072W 1164 nt4.02□□□□□ -1.77
SUB1P54000 MOH1YBL049W 417 nt4.02□□□□□ -1.77
SUB1P54000 PEX15YOL044W 1152 nt4.02□□□□□ -1.77
SUB1P54000 YOR342CYOR342C 960 nt4.02□□□□□ -1.77
SUB1P54000 RAD26YJR035W 3258 nt4.02□□□□□ -1.77
SUB1P54000 YAK1YJL141C 2424 nt4.02□□□□□ -1.77
SUB1P54000 YNR065CYNR065C 3351 nt4.01□□□□□ -1.77
SUB1P54000 SRP68YPL243W 1800 nt4.01□□□□□ -1.77
SUB1P54000 MSW1YDR268W 1140 nt4.01□□□□□ -1.77
SUB1P54000 YER066C-AYER066C-A 501 nt4.01□□□□□ -1.77
SUB1P54000 JAC1YGL018C 555 nt4.01□□□□□ -1.77
SUB1P54000 YHR214C-EYHR214C-E 300 nt4.01□□□□□ -1.77
SUB1P54000 YAR070CYAR070C 300 nt4.01□□□□□ -1.77
SUB1P54000 CSM3YMR048W 954 nt4.01□□□□□ -1.77
SUB1P54000 GRX7YBR014C 612 nt4.01□□□□□ -1.77
SUB1P54000 TFB6YOR352W 1032 nt4.01□□□□□ -1.77
SUB1P54000 LTP1YPR073C 486 nt4.01□□□□□ -1.77
SUB1P54000 YBR201C-AYBR201C-A 204 nt4.01□□□□□ -1.77
SUB1P54000 SSM4YIL030C 3960 nt4.01□□□□□ -1.77
SUB1P54000 STP2YHR006W 1626 nt4.01□□□□□ -1.77
SUB1P54000 USA1YML029W 2517 nt4.01□□□□□ -1.77
SUB1P54000 ELM1YKL048C 1923 nt4.01□□□□□ -1.77
SUB1P54000 MUS81YDR386W 1899 nt4.01□□□□□ -1.77
SUB1P54000 RSC58YLR033W 1509 nt4□□□□□ -1.77
SUB1P54000 ATG21YPL100W 1491 nt4□□□□□ -1.77
SUB1P54000 RPO21YDL140C 5202 nt4□□□□□ -1.77
SUB1P54000 UBP5YER144C 2418 nt4□□□□□ -1.77
SUB1P54000 DPH6YLR143W 2058 nt4□□□□□ -1.77
SUB1P54000 YDR526CYDR526C 471 nt4□□□□□ -1.77
SUB1P54000 RPB9YGL070C 369 nt4□□□□□ -1.77
SUB1P54000 PET54YGR222W 882 nt4□□□□□ -1.77
SUB1P54000 GAT3YLR013W 426 nt4□□□□□ -1.77
SUB1P54000 YLR076CYLR076C 423 nt4□□□□□ -1.77
SUB1P54000 RSF1YMR030W 1131 nt4□□□□□ -1.77
SUB1P54000 SRL1YOR247W 633 nt4□□□□□ -1.77
SUB1P54000 BNI4YNL233W 2679 nt4□□□□□ -1.77
SUB1P54000 AI4Q0065 1671 nt4□□□□□ -1.77
SUB1P54000 STU1YBL034C 4542 nt4□□□□□ -1.77
SUB1P54000 PSP1YDR505C 2526 nt3.99□□□□□ -1.77
SUB1P54000 CHD1YER164W 4407 nt3.99□□□□□ -1.77
SUB1P54000 YDR124WYDR124W 975 nt3.99□□□□□ -1.77
SUB1P54000 BUD26YDR241W 288 nt3.99□□□□□ -1.77
SUB1P54000 RTT105YER104W 627 nt3.99□□□□□ -1.77
SUB1P54000 YGR168CYGR168C 1131 nt3.99□□□□□ -1.77
SUB1P54000 SAM37YMR060C 984 nt3.99□□□□□ -1.77
SUB1P54000 DSS4YPR017C 432 nt3.99□□□□□ -1.77
SUB1P54000 DPB3YBR278W 606 nt3.99□□□□□ -1.77
SUB1P54000 BI3Q0115 1554 nt3.98□□□□□ -1.77
SUB1P54000 DIA2YOR080W 2199 nt3.98□□□□□ -1.77
SUB1P54000 APA2YDR530C 978 nt3.98□□□□□ -1.77
SUB1P54000 YER165C-AYER165C-A 357 nt3.98□□□□□ -1.77
SUB1P54000 RPB3YIL021W 957 nt3.98□□□□□ -1.77
SUB1P54000 YIR018C-AYIR018C-A 138 nt3.98□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms