Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CLCN2P51788 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCN2P51788 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCN2P51788 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCN2P51788 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCN2P51788 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.58■□□□□ 0.89
CLCN2P51788 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLCN2P51788 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.58■□□□□ 0.89
CLCN2P51788 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CLCN2P51788 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.58■□□□□ 0.89
CLCN2P51788 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLCN2P51788 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLCN2P51788 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLCN2P51788 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLCN2P51788 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLCN2P51788 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.58■□□□□ 0.88
CLCN2P51788 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CLCN2P51788 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCN2P51788 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCN2P51788 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCN2P51788 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLCN2P51788 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCN2P51788 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CLCN2P51788 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCN2P51788 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CLCN2P51788 OR2I1P-207ENST00000453522 948 ntBASIC20.57■□□□□ 0.88
CLCN2P51788 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCN2P51788 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLCN2P51788 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CLCN2P51788 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.57■□□□□ 0.88
CLCN2P51788 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.57■□□□□ 0.88
CLCN2P51788 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCN2P51788 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLCN2P51788 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.57■□□□□ 0.88
CLCN2P51788 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN2P51788 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN2P51788 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN2P51788 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN2P51788 AC007952.6-201ENST00000573168 2673 ntBASIC20.56■□□□□ 0.88
CLCN2P51788 AC003957.1-201ENST00000625108 2673 ntBASIC20.56■□□□□ 0.88
CLCN2P51788 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
CLCN2P51788 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CLCN2P51788 SLC47A1P1-202ENST00000449666 945 ntBASIC20.56■□□□□ 0.88
CLCN2P51788 AC105265.2-201ENST00000467189 838 ntBASIC20.56■□□□□ 0.88
CLCN2P51788 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.56■□□□□ 0.88
CLCN2P51788 AC126544.1-201ENST00000580842 1059 ntBASIC20.56■□□□□ 0.88
CLCN2P51788 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.56■□□□□ 0.88
CLCN2P51788 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLCN2P51788 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
CLCN2P51788 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN2P51788 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CLCN2P51788 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CLCN2P51788 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN2P51788 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN2P51788 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN2P51788 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CLCN2P51788 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN2P51788 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CLCN2P51788 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN2P51788 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CLCN2P51788 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLCN2P51788 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.55■□□□□ 0.88
CLCN2P51788 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN2P51788 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN2P51788 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.54■□□□□ 0.88
CLCN2P51788 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN2P51788 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CLCN2P51788 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CLCN2P51788 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
CLCN2P51788 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN2P51788 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN2P51788 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CLCN2P51788 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.54■□□□□ 0.88
CLCN2P51788 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.54■□□□□ 0.88
CLCN2P51788 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CLCN2P51788 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN2P51788 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLCN2P51788 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.54■□□□□ 0.88
CLCN2P51788 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.54■□□□□ 0.88
CLCN2P51788 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN2P51788 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.53■□□□□ 0.88
CLCN2P51788 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN2P51788 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN2P51788 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN2P51788 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
CLCN2P51788 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN2P51788 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN2P51788 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN2P51788 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLCN2P51788 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN2P51788 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN2P51788 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN2P51788 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.52■□□□□ 0.88
CLCN2P51788 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN2P51788 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN2P51788 ZNRF2P3-201ENST00000424200 374 ntBASIC20.52■□□□□ 0.88
CLCN2P51788 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.52■□□□□ 0.88
CLCN2P51788 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CLCN2P51788 AC004687.1-201ENST00000579003 1625 ntBASIC20.52■□□□□ 0.88
CLCN2P51788 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms